| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1730 |
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| Symbol | |
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| ID | 4603980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2117140 |
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| End bp | 2117853 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781093 |
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| Product | 3-demethylubiquinone-9 3-methyltransferase |
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| Protein accession | YP_927605 |
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| Protein GI | 119774865 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00224217 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGAAG CCTTGAACGT CGATATTCAG GAAATCGCCA AATTTGAAAA GATGGCCGCC
ACTTGGTGGG ATCCCGATGG CGAATTTAAA CCCCTTCATC AACTTAACCC GCTGCGACTG
AACTACATCG ATCAAACCTC AGGCGGTCTC TTTGGCAAAA AAGTGCTGGA TGTAGGCTGC
GGCGGCGGCA TTCTGTCAGA AAGCATGGCC CGCCTCGGTG CAAATGTTAC CGGCATCGAT
ATGGGCAATG AACCCCTGGA AGTGGCGAGA TTACACGCCC TTGAGACGGG TGTATCCCTA
AATTACGAGC GCTGCACGGC AGAAGAGCAC AGAGAGGTAA ATAGAGAAGC CTATGATGTG
GTCACCTGCA TGGAAATGCT CGAACACGTT CCGGATCCCC TCTCGGTGAT AGCCGCCTGT
TGCGACATGG TTAAACCGGG TGGATACGTG TTCTTCTCCA CCATTAACCG TAACCTGCGC
TCTTATGTGG AAACCATTCT CGGCGCCGAA TACCTGCTGA AAATGTTACC TGTCGGGACC
CACGATCATG GCAAATTCAT TCGCCCGTCT GAGCTTATCG CTATGGTCGA CCAAACCGAG
CTTCTCTGTA AAGATGCCAC AGGTGTGACT TACAATCCCA TCACGGGTAC CTTCCGCTAT
ACCAGCAGCG TTGAAGTTAA CTACATGATT GCTACGGTAA AGCCCCTTGA GTGA
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| Protein sequence | MSEALNVDIQ EIAKFEKMAA TWWDPDGEFK PLHQLNPLRL NYIDQTSGGL FGKKVLDVGC
GGGILSESMA RLGANVTGID MGNEPLEVAR LHALETGVSL NYERCTAEEH REVNREAYDV
VTCMEMLEHV PDPLSVIAAC CDMVKPGGYV FFSTINRNLR SYVETILGAE YLLKMLPVGT
HDHGKFIRPS ELIAMVDQTE LLCKDATGVT YNPITGTFRY TSSVEVNYMI ATVKPLE
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