| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1724 |
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| Symbol | |
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| ID | 4603974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2109514 |
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| End bp | 2111529 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781087 |
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| Product | NADH:flavin oxidoreductase/NADH oxidase |
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| Protein accession | YP_927599 |
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| Protein GI | 119774859 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00189686 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0287247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTC CGCACTTGTT GAAGCCATTG GATTTAGGCT TTACCCAGCT TAAAAACCGC
GTACTCATGG GCTCTATGCA CACAGGGCTA GAAGAAGAAA AGGGCGGCTT TGAAAAGCTG
GCTGCATTTT ATCGGGAGCG TGCTGCCGGT GGCGTAGGTC TGATAGTGAC CGGGGGTATT
TCCCCTAATT TACGTGGCAG ATTAGCGCCC CATGCCTCTC AGCTGAGTTT TCCCTGGCAG
GTGAAACGCC ACCGTATTGT CACTGACGCT GTGCATGGCG CAGGTGGCAA AATCTGTATG
CAAATTTTGC ATGCGGGCCG CTACGGTTAT CATCCGTTTT CCCTGGCACC CAGTGCGCTT
AAAGCCCCCA TTACGCCTTT TAAGCCCAGT GCCATGTCGG CTCGGCAAAT TCGCAGCACC
ATCAAGGATT ACGCCACCAG TGCCAAACTG GCACGTAAGG CAGGCTACGA TGGTGTGGAA
GTCATGGGCT CTGAAGGCTA TCTCATCAAT CAGTTTATCT GCTCACGCAC CAATAAACGT
CAGGATGAAT GGGGCGGCAG TTTTGAAAAC CGCAGCCGTT TCCCGTTGGA GATAGTGCGT
GCCATTCGCG CTGCGGTAGG ATCTGATTTT ATTATTATCT TTCGCCTCTC GATGCTGGAT
TTGGTGGAAG AAGGCTCCAG CTGGGATGAA GTGGTGGCAC TAGCCAAAGG GCTCGAAGAA
GCGGGCGTTA CCATTATTAA TACCGGCATT GGCTGGCATG AAGCCCGGAT CCCAACCATT
GCCACCAGTG TGCCCAGAGG CGCCTTTGCC TGGGTGACTG AGCGTTTGAA GCAGGAAGTG
CACATTCCAC TCATTGCGAC CAACAGGATT AATACGCCGG AAATTGCTGA GCAAATTCTC
GCATCCGGTC AGGCTGATAT GGTGTCAATG GCAAGACCAT TCCTGGCCGA CCCTGACTTT
GTCAATAAAG CGGCCGCAGG GCAGAGTGAG CTGATTAATA CCTGTATTGG CTGTAATCAG
GCGTGTCTAG ACCATACCTT CAAGATGAAG CGCGCAACCT GTTTGGTTAA CCCAAGGGCC
TGTTACGAAA CCGAGATTAA CTTCCCCAAA ACCTCGCAGC CCAAAAAGAT AGCCGTGATG
GGGGCAGGGC CGGCGGGAAT GGCGTTTTCC ATATACGCAG CCAGCCGCGG CCATAATGTG
GTGTTGTTTG AAGCCAAAGG GGAAGTGGGG GGCCAATTCA ACCTTGCCCG TAAAATTCCC
GGTAAGGAAG AGTTTGACGA AACCATCCGC TATTTCAATA ACCAGATGCG GCAAACCGGG
GTTGAGCTAA GGCTTAACAC CCGTCTCGAT GCCTCAGTGC TTAATGATGA AGATTTTGAT
GAGGTAGTTA TCGCCGCGGG TGTGGTTCCC CGTGCAGTAA AACTGCCGGG CTTCGATTCG
CCCCGGGTGG TCAATTATCA ACAGGTGCTG AATGGTGAAG TAAGGGTAGG ACAGAAAGTG
GCCTTGATTG GGGCCGGAGG TATTGGCTTT GATATGGCAC ATTACCTGGG TGAAAAAGAC
TCAACTACGC TCGATCCCAA ACGTTGGCGT GACCAATGGG GCATAGACGA TGCCTACGAA
GCCCGCGGCG GCCTCAAGGC GCCAATAAAA GAACCGGCCG AGCGCACCAT TTACCTGCTT
CAGCGTAAAA CCACGCCCAT GGGCAAGGGA CTTGGGAAGA CCACGGGCTG GATCCACCGC
ACCGTGGCCA AGATGCATGG GGTTGTTCAG ATGAACGGCG TCAGTTATGA GTCCTTCGAT
GAGCAAGGGT TACATATTCG TGTGAATGAA GAGACCAAGG TACTCGATGT GAATACAGTC
ATACTCTGCG CCGGTCAGGA ATCCAATCGG TCTCTGGTGG CCGAAATGGA AGCCACAGGT
AAGCCTGTTC ATTTGATTGG TGGTGTGGAT GTAGCGGCAG AGCTCGATGC CAAACGGGCC
ATTCGCCAGG GCGCAGAGCT CGCGATGCGC ATCTAA
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| Protein sequence | MSFPHLLKPL DLGFTQLKNR VLMGSMHTGL EEEKGGFEKL AAFYRERAAG GVGLIVTGGI
SPNLRGRLAP HASQLSFPWQ VKRHRIVTDA VHGAGGKICM QILHAGRYGY HPFSLAPSAL
KAPITPFKPS AMSARQIRST IKDYATSAKL ARKAGYDGVE VMGSEGYLIN QFICSRTNKR
QDEWGGSFEN RSRFPLEIVR AIRAAVGSDF IIIFRLSMLD LVEEGSSWDE VVALAKGLEE
AGVTIINTGI GWHEARIPTI ATSVPRGAFA WVTERLKQEV HIPLIATNRI NTPEIAEQIL
ASGQADMVSM ARPFLADPDF VNKAAAGQSE LINTCIGCNQ ACLDHTFKMK RATCLVNPRA
CYETEINFPK TSQPKKIAVM GAGPAGMAFS IYAASRGHNV VLFEAKGEVG GQFNLARKIP
GKEEFDETIR YFNNQMRQTG VELRLNTRLD ASVLNDEDFD EVVIAAGVVP RAVKLPGFDS
PRVVNYQQVL NGEVRVGQKV ALIGAGGIGF DMAHYLGEKD STTLDPKRWR DQWGIDDAYE
ARGGLKAPIK EPAERTIYLL QRKTTPMGKG LGKTTGWIHR TVAKMHGVVQ MNGVSYESFD
EQGLHIRVNE ETKVLDVNTV ILCAGQESNR SLVAEMEATG KPVHLIGGVD VAAELDAKRA
IRQGAELAMR I
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