Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1717 |
Symbol | |
ID | 4603967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2101773 |
End bp | 2103560 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639781080 |
Product | putative lipoprotein |
Protein accession | YP_927592 |
Protein GI | 119774852 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.271095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0681591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAAA CTACGTTAGC CCTCGCCATT TCACTGGCCG CACTGTCTCT TGGCGCCTGC ACAGATAGCA CCACCTCAAG TGGTCATGTA CAACATGCCA CTGCCAGTAG TGTCACAAGC CAACAGACTC AATCTTTTGC CTCCTTCAGT GAAGCCTTTA TCGATTCCCT CTGGCAAGTG GCTCCGACCT GGGCACTCTA CAGCGGTTAT CACAAATACG ATGGCATCTT GGAAGTAGCC GATGAGGCCC AGCGTGCCAA AACCCTCGCG TTTGTTAATT CCCAGCGTGA GATGCTACAG GCCTTCAACA CAAAAAATCT CTCCACCAGT GAGTTGATTG ATTACCGCCT GATTGAAAAT CTGCTCAATA GCGTCGAGTG GGAACAAACC CGTTTTCGTG CCTGGCAGTG GGATCCTTCC GGTTACAATG TGGCAGGTGG CTTTGCACAA ATCATCAATG AAGATTTTGC GCCGTTGGAT GAACGTTTGC GCTCTGTGGT ATCTCGTCTT GAGAATGTAC CCGCCTACTA TGAAGCGGCG AGAAAAAATA TCAAAAATCC GACGCTGGAA CACACCGAGC TTGCATTGCT GCAGAATCAG GGTGCGTTCT CTGTTTTTAA CGATGAGCTT ATTGCAAAAG TGGAGAGTTC TGGCCTTACG GATGCCGAGA AAACACTGTT TAAACAGCGT TTTGATGCCG CAATTTCAGC GATAAATGAG CATATCATTT GGCTCGAAAC CCTGAGCAAT AACCTCAAGG TCAATGGTGC CCGTGATTTT CGTATTGGCG AAGCACTTTA CGAAGAAAAA TTTGCCCTGG ATATACAGTC GGGTATGACG GCCAAGGCGC TTTACAATAA AGCCAGCGCC GATATGGTGC GGGTGCATGC TGAAATGGCC AGGATCACCA AGGAGATTTG GAGCAAGTAC TTCACTGAGA CAATGCCCGA CGACTCAAAG GTCGCGACGC GAATGCTGAT TGATAAGCTG TCGGCAAAGC ACGTGAAGCG TGAAGACTTT GTGAATGAGG TGAGGGCGCA AATCCCAGAG CTGGTTAAAT TCGTCAATGA TAAACAGCTT ATTACGCTCG ACCCCAATAA ACCACTGGTG GTACGCGAGA CACCGGAATA CATGCGTGGC TACGCCGGCG CCTCTATCAG TGCCCCCGGA CCTTATGACA AAGGGGGCAA TACCTATTAC AACGTGACTC CGCTGGATGG GATGTCGGAC GAATCTGCCG AGTCATATTT GCGTGAATAC AATCACTGGA TTTTGCAGGT GCTCAATATC CACGAGGCGA TTCCGGGCCA CTACACGCAA TTGGTGTATT CCAACGAGTC CCCCAGTCTG ATTAAGAGCC TGTTTGGCAA TGGCGCTATG GTAGAGGGCT GGGCGGTATA CACAGAGCGG ATGATGCTGG AAGAGGGATA TGGCAACTTT GAACCTGAAA TGTGGCTGAT GTATTACAAG TGGAACCTGC GGGTGATTGC CAACACCATT TTGGATTACA GTATTCAGGT CAAGGGCATG ACACAGGAAG AGGCCATGAC GCTGATGATG GAAGAGGCCT TCCAACAAGA GGCTGAAGCG GCGGGCAAAT GGCGCCGGGC GACCCTAAGC CAGGTGCAGC TGACCAGCTA TTACGCCGGG TATCGGGAAA TCTACGACTT CAGAGAAGAG CTCAAAGCCA AATCTCCCGA GAGTTTTGAT TTGAAAGCAT TCCATGAGCG TTTCCTGAGC TTTGGCAGTG CGCCGGTCAA ATATATCCGA GAGTTAATGG TGAACTAA
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Protein sequence | MKKTTLALAI SLAALSLGAC TDSTTSSGHV QHATASSVTS QQTQSFASFS EAFIDSLWQV APTWALYSGY HKYDGILEVA DEAQRAKTLA FVNSQREMLQ AFNTKNLSTS ELIDYRLIEN LLNSVEWEQT RFRAWQWDPS GYNVAGGFAQ IINEDFAPLD ERLRSVVSRL ENVPAYYEAA RKNIKNPTLE HTELALLQNQ GAFSVFNDEL IAKVESSGLT DAEKTLFKQR FDAAISAINE HIIWLETLSN NLKVNGARDF RIGEALYEEK FALDIQSGMT AKALYNKASA DMVRVHAEMA RITKEIWSKY FTETMPDDSK VATRMLIDKL SAKHVKREDF VNEVRAQIPE LVKFVNDKQL ITLDPNKPLV VRETPEYMRG YAGASISAPG PYDKGGNTYY NVTPLDGMSD ESAESYLREY NHWILQVLNI HEAIPGHYTQ LVYSNESPSL IKSLFGNGAM VEGWAVYTER MMLEEGYGNF EPEMWLMYYK WNLRVIANTI LDYSIQVKGM TQEEAMTLMM EEAFQQEAEA AGKWRRATLS QVQLTSYYAG YREIYDFREE LKAKSPESFD LKAFHERFLS FGSAPVKYIR ELMVN
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