Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1701 |
Symbol | |
ID | 4603952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2082200 |
End bp | 2082727 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781064 |
Product | flavodoxin FldA |
Protein accession | YP_927577 |
Protein GI | 119774837 |
COG category | [C] Energy production and conversion |
COG ID | [COG0716] Flavodoxins |
TIGRFAM ID | [TIGR01752] flavodoxin, long chain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000646735 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00968466 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTACTG TAGGTCTTTT TTTCGGCAGT GACACAGGCA ACACCGAAGC TGTCGCCAAG ATGATCCAGA AAAAACTGGG TAAGCAGATG GTGGATGTCA AAGACATCGC CAAGAGCACC AAGGAGCAGA TCGCCGACTT TGACCTGCTG CTGTTCGGGA TCCCAACCTG GTACTACGGT GAAGCGCAGT GCGATTGGGA CGACTTTTTC CCTGAGCTTG AGCAAATCGA CTTTACCGAC AAGCTGGTAG CCATTTTCGG TTGCGGCGAT CAGGAAGATT ATGCCGAATA CTTCCTCGAT GCCATGGGCA TGGTACGTGA CATCGTCGAA ACCCGTGGTG GCATTATCGT TGGTCACTGG CCTACTGCCG GTTATAACTT CGAAGCCTCC AAAGCGCTGG TCGATGACGA CCACTTTGTG GGTCTGGGTA TTGATGAAGA CCGTCAGCCC GAACTCACCG AAGAGCGCGT TGATCAGTGG GTAAAACAGA TTTACGAAGA AATGTGTCTG GCCGAGTTGG CAGACTGA
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Protein sequence | MATVGLFFGS DTGNTEAVAK MIQKKLGKQM VDVKDIAKST KEQIADFDLL LFGIPTWYYG EAQCDWDDFF PELEQIDFTD KLVAIFGCGD QEDYAEYFLD AMGMVRDIVE TRGGIIVGHW PTAGYNFEAS KALVDDDHFV GLGIDEDRQP ELTEERVDQW VKQIYEEMCL AELAD
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