Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1699 |
Symbol | |
ID | 4603950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2080349 |
End bp | 2080915 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639781062 |
Product | elongation factor P |
Protein accession | YP_927575 |
Protein GI | 119774835 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000109401 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0250374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTG CTCATGAAAT CCGTCCCGGT AACGTGATCA TGTTTAACGA CAGCCCATGG GTTGTTCAGA AGACTGAAAC CACCCGTTCA GGCCGTAACG CTGCCATCGT TAAGATGAAG CTGAAAAACC TGCTGATCGA CTCTTCTACC GAGACCACCT TCAAGGGTGA AGACAAGATG GACGTTATCG TTCTGGAGCG TCTGGATTGC ACCTACTCTT ACTTCGCTGA TCCAATGTAC GTATTCATGG ATTCCGAGTA CAACCAGTAC GACGTTGAAG CAGAAAACGT GGGTGACGCT GCCAAGTACA TCGTTGATGG CATGGAAGAA ACCTGCCAGG TAACCTTCTA CGAAGGCAAG GCCATTTCTG TTGAAATGCC AACCACCATC ATCCGTGAAG TTGGCTACAC TGAGCCAGCT GCCCGTGGTG ACACTTCCGG TAAAGTAATG AAGCCTGCCA AACTGGTTGG CAGCGACATC GAACTGATGG TTGCTGACTT CGTTAAAGAA GGCGACAAAA TCGAAATCGA CACCCGTACC GGTGAATTCA AGAAGCGCGT AAACTAA
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Protein sequence | MKTAHEIRPG NVIMFNDSPW VVQKTETTRS GRNAAIVKMK LKNLLIDSST ETTFKGEDKM DVIVLERLDC TYSYFADPMY VFMDSEYNQY DVEAENVGDA AKYIVDGMEE TCQVTFYEGK AISVEMPTTI IREVGYTEPA ARGDTSGKVM KPAKLVGSDI ELMVADFVKE GDKIEIDTRT GEFKKRVN
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