Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1684 |
Symbol | asnC |
ID | 4603935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2058084 |
End bp | 2059484 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639781047 |
Product | asparaginyl-tRNA synthetase |
Protein accession | YP_927560 |
Protein GI | 119774820 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000115378 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.235837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTG CATCTATCGC ATCCGTATTT AAGGGTGATT TCGCCCCCGG TACCGAGATC ACGGTACGCG GTTGGGTTCG TACCCGTCGG GATTCCAAGG CAGGGATCTC CTTCCTCGCC GTCTATGACG GCTCCTGTTT CGATGCCATT CAGGGCGTAG TGCCCAATGC TCTGTCCAAT TATAATGACG AAGTGCTGAA GCTGACCGCT GGCTGCTCTG TGGAAATGAC CGGTAATCTG GTGGAGTCTC CCGGCTCAGG CCAGGCATTC GAACTTCAGG CCACTGCCGT GAAAGTGACC GGCTGGGTAG ACGATCCGGA CACTTACCCC ATGGCTGCCA AGCGCCACTC AATCGAGCAC CTGCGCGACG TGGCTCACCT GCGTCCACGT ACCAACATCA TTGGTGCCGT GGCCCGTGTG CGTAACTGTC TGTCTCAGGC CATTCACCGC TTCTACCACG AGAATGGTTT TATTTGGGTA TCCACTCCCA TCATCACCGC CTCCGACTGT GAAGGCGCCG GTGAGATGTT CCGCGTCTCC ACTCTGGACA TGGAAAACCT GCCACGTACC GACGCTGGCA AAGTAGATTA CGACCAGGAC TTTTTCGGTA AAGAAGCCTT CCTGACCGTA TCGGGTCAGC TGAACGGCGA AACTTACGCC TGTGCCCTGT CAAAAATCTA CACCTTCGGC CCAACCTTCC GCGCCGAAAA CTCCAACACC AGCCGTCACC TGGCGGAATT CTGGATGGTG GAGCCGGAAG TGGCCTTTGC CGATCTGAAC GATATCGCCG GTCTGGCGGA ATCCATGCTC AAGTACTGCT TCAATGCCGT ACTGCAAGAG CGCATGGACG ATATGAAGTT CTTCGCCGAG CGTGTAGATG GCAGTGTTAT CGATCGTCTG CAAAGTTTTG TGAGCAGCGA CTTTGCCCAG GTTGATTACA CCGACGCCGT TGAAATCCTG CAAAACTGCG GTAAGACCTT CGAATATCCC GTTGAGTGGG GTATCGATCT GCAGTCTGAG CACGAGCGTT ATCTGGCCGA AGAGCACTTC AAAGCCCCTG TGGTAGTGAA GAACTATCCA AAAGACATCA AAGCCTTCTA CATGCGCCTC AACGAAGATG GCAAGACAGT CGCGGCCATG GATGTACTGG CACCCGGCAT CGGTGAAATC ATCGGTGGCT CCCAGCGTGA AGAGCGACTG GACGTACTGG ATGCCCGCCT CGAAGAGATG AACCTGTCGA AAGAAGACTA CTGGTGGTAC CGTGATCTGC GCCGTTATGG CACAGTGCCA CATGCCGGTT TCGGTCTGGG CTTCGAGCGT CTGGTCTCTT ACGTGACCGG TGTGGGTAAC ATCCGTGATG TGATCCCATT CCCACGTGCA CCACGCAGCG CTAACTTCTA A
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Protein sequence | MSIASIASVF KGDFAPGTEI TVRGWVRTRR DSKAGISFLA VYDGSCFDAI QGVVPNALSN YNDEVLKLTA GCSVEMTGNL VESPGSGQAF ELQATAVKVT GWVDDPDTYP MAAKRHSIEH LRDVAHLRPR TNIIGAVARV RNCLSQAIHR FYHENGFIWV STPIITASDC EGAGEMFRVS TLDMENLPRT DAGKVDYDQD FFGKEAFLTV SGQLNGETYA CALSKIYTFG PTFRAENSNT SRHLAEFWMV EPEVAFADLN DIAGLAESML KYCFNAVLQE RMDDMKFFAE RVDGSVIDRL QSFVSSDFAQ VDYTDAVEIL QNCGKTFEYP VEWGIDLQSE HERYLAEEHF KAPVVVKNYP KDIKAFYMRL NEDGKTVAAM DVLAPGIGEI IGGSQREERL DVLDARLEEM NLSKEDYWWY RDLRRYGTVP HAGFGLGFER LVSYVTGVGN IRDVIPFPRA PRSANF
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