Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1676 |
Symbol | |
ID | 4603927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2050294 |
End bp | 2050851 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639781039 |
Product | hydrogenase expression/formation protein |
Protein accession | YP_927552 |
Protein GI | 119774812 |
COG category | [C] Energy production and conversion |
COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
TIGRFAM ID | [TIGR00072] hydrogenase maturation protease [TIGR00140] hydrogenase expression/formation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.903036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCC TGCTACTCGG CATTGGCAAT ATACTCTTCG CCGACGAAGG CGTAGGCGTA CACTTTGTCA ATTATATATC TGAAAATTAT CGCTTTACCC ACCCGCTCCA CTCCCTTGAT ATTCTCGATG GCGGTACTCT GGCCCAGGGC CTGACTCCCA TTATTGCCAA ATACGACCAT TTGATTGTGT GTGATACGGT CAACGCTCCC GGGGTTTCAC CCGGCGAAGT CTATTTTTTT GATTTTGATG CAGCGCCCGC TGAAATTGAC TGGCAAGGCA GCGCCCACGA AGTCGAAATG CTGCAAACAC TCACCATGAT GGAGATGCTG GGCGACCGGC CGAAAACCTT TGTACTGGGT GTCACCCCTA CCGTGCTGGA ACCCATGCAT CTGGGACTTA CCGAGGCACT TGGCAGCGCT ATTCCGGTAA TGGAACAGGC GCTGATTAAC CACCTGAAGC AATTGGGTTT CCAGTCTGAA CGCATCGCCA ATAAACCCAT TACCAGTTTT TACCAAGACG GGATCACCCG CGAGGTATCA GTGGATGAAA ACCATTAG
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Protein sequence | MKVLLLGIGN ILFADEGVGV HFVNYISENY RFTHPLHSLD ILDGGTLAQG LTPIIAKYDH LIVCDTVNAP GVSPGEVYFF DFDAAPAEID WQGSAHEVEM LQTLTMMEML GDRPKTFVLG VTPTVLEPMH LGLTEALGSA IPVMEQALIN HLKQLGFQSE RIANKPITSF YQDGITREVS VDENH
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