| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1673 |
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| Symbol | |
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| ID | 4603924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2045274 |
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| End bp | 2046050 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781036 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_927549 |
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| Protein GI | 119774809 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCAGG ACTGTGGCTG CTCATTACCG CGATTCGGGA TGCAAGATAC CCATCAGCAC
GCTCATGAAC ATCATGAGCT CACCACCAAT CCCCAACTGA ACGACGCCAA AACGCTGTCA
GTTATCCATA AGATTCTGGA TAAGAATGAC GTGGAAGCGG CTCACAACCG CGGTCATTTC
GAAGCCCATC AGATAAGCGC CTATAACCTG ATGAGCAGTC CCGGCAGCGG TAAAACCACC
TTGCTGGAGT GCTTGCATGA ATATCTGGGA CTGACCTACG GCGTGATTGA GGGCGATCTT
GAGACCTCAA AAGATGCCGA TCGCCTGCTG GCGAAAGGTA TCCAGGCGGT GCAAATTCAA
ACCGGCAGCG CCTGCCATTT GGACGCCTTT ATGGTCCATG GTGCCCTGCA CCGTCTTACT
CTGGATGAAG GCTCCATCGC CTTTATCGAA AACGTGGGCA ATCTGGTGTG CCCGGCTAGC
TATGATGTGG GTACCCATCG CAATATCGTG CTCTTATCCG TGCCTGAGGG TGACGACAAA
ATTGCAAAAT ACCCGGTGAT GTTCCGCCGC GCGGATCTGG TTCTTATTAC CAAGTCCGAT
CTCACGCCCT ACTTTGACTT CAGTATTGAG AGCGCCAAAG AGAGCCTCAG AGCGCTCAAT
CCCCAGTGTG AAGTGATTGA ATTGTCTGTC AAGGATGGTC GCGGCATGGA CAGGCTCGCA
ACCTGGTTAA AGCAGGACCA CAGCAGCCGC TATCATGCCG ACGTTGGGGG AAATTGA
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| Protein sequence | MCQDCGCSLP RFGMQDTHQH AHEHHELTTN PQLNDAKTLS VIHKILDKND VEAAHNRGHF
EAHQISAYNL MSSPGSGKTT LLECLHEYLG LTYGVIEGDL ETSKDADRLL AKGIQAVQIQ
TGSACHLDAF MVHGALHRLT LDEGSIAFIE NVGNLVCPAS YDVGTHRNIV LLSVPEGDDK
IAKYPVMFRR ADLVLITKSD LTPYFDFSIE SAKESLRALN PQCEVIELSV KDGRGMDRLA
TWLKQDHSSR YHADVGGN
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