| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1656 |
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| Symbol | |
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| ID | 4603907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2021005 |
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| End bp | 2023458 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781019 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_927532 |
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| Protein GI | 119774792 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.159035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAGTGA CCCATTCTTC TTCGCTTCGT GCCCTCAGCC TTGCCATAGC AGCCGCGCTT
GGTGTGTCTG CCTGCCAAAA GGCCCCTGCA CCCCAGGAAA CCACTCCGGA TAAGGCGATG
GTGAAAATTG CCCCGGGCGC GCCCGGCAAC ACGCCCTTGT GGGCCTTCGC AGGCAAAACC
GGAATAGGTA CCAGTTACGA ACCCTATGTG GACGGTGCTT ATGTGAGTAC CGTCGAGAAT
CCGGTGAGCC GGGTGTGGTA TTCGGTGGCC AACGGCGTGC TGACCGAAAC CATGTATGGT
CTGATTCACA ATGCTCAGCT TCGTGAGCTG TCCTTTATCA TTAAGGGCGA GGATTTTATT
GATTTTGAAG CCAAAGATGC CAACCATCAC CAGGACTATC TGCACCTGGA TGATAAAGGG
CTTCCGGAGT CCCTGGCACT GCTGCTCACC AGTACCGATA AAGAGCAAAA ATACCGCATC
GAGAAAAAGA TAGTCACAGA TCCCCATCGG GATTCTCTTA TCATGAGGGT CAGCATTGAA
GCCCTCGAAG ATGGCATTAC CCCCTTCCTG TATGCCGATC CGCACATCGA TAATGGTGGC
GCCGATGACC TGGCGTATCT GTCTGACACC GGTTTTGTTG TTACCGATAA GGCAGACGCT
TCCAGCGCCT TGAGTCTGGA GATCAGTATC GATTTCGTGC GCCGTCAGGT GGGCTTTGAA
GGGGTATCCA GTGGCGTCGA GGCCATTAAG GCCGGGCATC CCCTACCCGG CTACAGCCAA
ACCTTTGCCG ATGCCGCGGC TCCCCAGGTG GGGAACGTGG CCCTCACCGG CGAGCTTAAA
ACACTGGCCA GGGGTGAAAC CCTCACGTTT GATGTAGTAC TGGGCTTTGG TCAGGGTGCG
GATGCAGCAA CGGCCAACGC CAGGGCGTCC CTTACCGCCG GCTTTGATTC GCTGGCACAG
GACTTCAGAG GCAACGACAC AACCCCCGGC TGGCGCCAGT ATTTGGCGTC CTTGCCAGCC
CTCAGCGCCA TGGGTAATGC CACGGCAGAC AATGGCCGCC TCCTTAACCT GAGTGCCATG
GTGCTCAAGG CACAGGAAGA CAAAACCCAT GCAGGCGCGC TGATTGCCTC CCTCTCCAAC
CCTTGGGGCG ATACCATACC TGCGGTCACG CCAAGCACTG GTTACAAGGC CGTTTGGCCA
AGGGATTTTT ATCAGTGCGC CATGGCGTTT TTAGCCCTGG GTGATACCCA AACCCCCAAG
GTCGCATTTG AGTACCTCAA ACAGATCCAG GCAGGCCCGG GTCTCAAAGG CTACGAAGGT
GCGCCCGGTT GGTTCCTGCA AAAGACCCAT GTGGATGGGC AAATAGAATG GGTTGCGGTG
CAGCTGGACC AAACTGCCAT GCCGATTATG CTTGGCTGGA AGCTGTGGCA AGCCGGTGAG
CTCAGTGATG ATGAGGCACG TCACTGGTAT CAGGAGATGC TCAAGAGCGC GGCCGACTTT
TTGGTCAGCG GCGGTCACAT TAAACTCGAC TGGAATGAGC GTACCATCAC CCCACCCAGT
ACCCAACAGG AACGCTGGGA AGAACAGGCC GGGTTTTCAC CTTCTACCAT AGCGGCTGTG
ATTACCGGTT TGCAGGCAGC AGCAGCCCTT GCCGAGCATG CAGGCGACAG CGAAGGGGCG
CAGAAATACC TCGCTGCTGC CACGCGCTAC AGTGAGCAGC TCGAAGCTCG TACCGTAACA
AACAAAGGGC TGCTGTCGGA CAAACCCTAT ATTCTGCGGA TTTCCCCCGA GGGCACACCG
GATACCGACG CCAAGCTCGC CGACAATAAT GGTCGTCCGG GGCTGGATCA GCGTCAGATC
CTCGATGGTG GCTTCCTGGA GTTGGTGCGT TATGGCGTGC GCACCGCTGA CAATCCACTC
GTCCTCAATA CCCTTGCTCT GGTGGACGAC ACGACCCTGG AAGACAATCT GCGCATCCGT
TATGACTTCA CCACGGCCCA GGGACAGGCA TTTCCCGGCT TCAGGCGTTA CGGTAACGAC
GGCTACGGCG AAGATACTGT CACAGGCGCC AACTATGCCG AGAACGGCAG CAACAGTGCC
AATCAGCGTG GACGGGTATG GCCCTTCTTT ACCGGCGAGC GCGGTCATTA TGAGCTTGCC
AAAGCCACAG TGGGTGGCCA ACCACTCAGT GAGGCCGATA AGCGCCGCCT GATTAATACC
TACGTGGCAG GAATGGAAAG CCTTGCCAAC GGCGGCGGTA TGCTGCCTGA ACAGGTGTGG
GACGGTGTGG GCGACGCCAC CCGCTTTGGC TATCGTTTGG GTGATGGTAC CAACTCGGCG
ACCCCCCTTG CCTGGACCCA CGCCGAATAC GTAAAACTGG TGCGCTCCGT CCATGATGCC
AAGGTCTGGG ATAACTACCC CTTCGCCAAG CAGCCAGCCC CTGAAACAAA GTAG
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| Protein sequence | MPVTHSSSLR ALSLAIAAAL GVSACQKAPA PQETTPDKAM VKIAPGAPGN TPLWAFAGKT
GIGTSYEPYV DGAYVSTVEN PVSRVWYSVA NGVLTETMYG LIHNAQLREL SFIIKGEDFI
DFEAKDANHH QDYLHLDDKG LPESLALLLT STDKEQKYRI EKKIVTDPHR DSLIMRVSIE
ALEDGITPFL YADPHIDNGG ADDLAYLSDT GFVVTDKADA SSALSLEISI DFVRRQVGFE
GVSSGVEAIK AGHPLPGYSQ TFADAAAPQV GNVALTGELK TLARGETLTF DVVLGFGQGA
DAATANARAS LTAGFDSLAQ DFRGNDTTPG WRQYLASLPA LSAMGNATAD NGRLLNLSAM
VLKAQEDKTH AGALIASLSN PWGDTIPAVT PSTGYKAVWP RDFYQCAMAF LALGDTQTPK
VAFEYLKQIQ AGPGLKGYEG APGWFLQKTH VDGQIEWVAV QLDQTAMPIM LGWKLWQAGE
LSDDEARHWY QEMLKSAADF LVSGGHIKLD WNERTITPPS TQQERWEEQA GFSPSTIAAV
ITGLQAAAAL AEHAGDSEGA QKYLAAATRY SEQLEARTVT NKGLLSDKPY ILRISPEGTP
DTDAKLADNN GRPGLDQRQI LDGGFLELVR YGVRTADNPL VLNTLALVDD TTLEDNLRIR
YDFTTAQGQA FPGFRRYGND GYGEDTVTGA NYAENGSNSA NQRGRVWPFF TGERGHYELA
KATVGGQPLS EADKRRLINT YVAGMESLAN GGGMLPEQVW DGVGDATRFG YRLGDGTNSA
TPLAWTHAEY VKLVRSVHDA KVWDNYPFAK QPAPETK
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