Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1649 |
Symbol | |
ID | 4603900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2013924 |
End bp | 2014433 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639781012 |
Product | PTS system glucose-specific transporter subunit |
Protein accession | YP_927525 |
Protein GI | 119774785 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2190] Phosphotransferase system IIA components |
TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.778842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATTTT TCAGCCGAAT TCGGCGACTG ATTTCCGGGG CGCCAACCAT TGAAGGTGGC ATTGCCATAC TCGCGCCGGT TTCCGGCGAG ATTTATCCCA TAGAGAAGGT GCCCGACGTG GTGTTTGCCG AGAAAATCGT CGGTGACGGC ATAGCCATTG CCCCAGAGGG AGACACCATC TACGCCCCCA TTGACGGCAC CATAGGCAAA ATTTTCGAGA CCAACCATGC CTTCAGTATC GAGTCCCCCC AGGGGCTGGA GTTGTTTGTA CACTTTGGTG TGGGCACGGT GGAACTCAGG GGCAACGGCT TTAAACGTCT CGCCGAAGAA GGCCAGCAGG TGAAGGCTGG CGATCCCATA CTGGCGTTCG ATTTGGAATA CCTTCGCGAA CACGCCGATA GCCTGCTTAC CCCCGTGGTG CTGGCGAACA TGGAAGACAT CAAGTACCTG GAGAAATCCC AGGGCCGGGT CGAAGCCGGC AAAGACGTGA TATTTACCGT CGAAATCTGA
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Protein sequence | MGFFSRIRRL ISGAPTIEGG IAILAPVSGE IYPIEKVPDV VFAEKIVGDG IAIAPEGDTI YAPIDGTIGK IFETNHAFSI ESPQGLELFV HFGVGTVELR GNGFKRLAEE GQQVKAGDPI LAFDLEYLRE HADSLLTPVV LANMEDIKYL EKSQGRVEAG KDVIFTVEI
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