Gene Sama_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1642 
Symbol 
ID4603893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2008318 
End bp2008929 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content55% 
IMG OID639781005 
Productcarbonate dehydratase 
Protein accessionYP_927518 
Protein GI119774778 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00101631 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.513692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC TCAAACCCTT GTTCGACAAT AACCGTCGAT GGGCACAGCG CATCCTGCAG 
GAAAACCCGG GCTTTTTCGA AACCCTGGCC AAGCAGCAAA ACCCCGAATA CCTGTGGATT
GGTTGCTCCG ATAGCCGAGT TCCCTCCAAT CAAATCATTG ACTTGCTGCC CGGAGAGGTC
TTTGTTCACC GTAATATCGC CAACATGGTG ATCCACACCG ACCTCAACTG TCTGTCGGTG
CTTCAGTACG CAGTGGACGT GCTGCAGGTG AAACACATCA TGGTGGTGGG CCATTACGGC
TGCGGCGGCG TCCGTGCCGC CATGGGCAGC GCTCGCCTTG GCCTTATCGA CAACTGGCTG
GGTCATCTTC GTGATATACA TCGCCTGCAC AACGATGAGC TGACAAACCT TGACGATCAG
GCACGCTTTG ACCGCCTGTG CGAGCTCAAT GTGATTGAGC AGGTGGCCAA TGTCAGCGAA
TCAAACATAG TCCAGGAAGC CTGGGCCCGC GGTCAGGAAG TCGCCATCCA CGGTTGGATA
TATGGCATCA CCAACGGACT GCTCACCGAC CTGGATGTTA CCGTCGACCG GGAGACCTTT
CTTGGCCAAT AA
 
Protein sequence
MKLLKPLFDN NRRWAQRILQ ENPGFFETLA KQQNPEYLWI GCSDSRVPSN QIIDLLPGEV 
FVHRNIANMV IHTDLNCLSV LQYAVDVLQV KHIMVVGHYG CGGVRAAMGS ARLGLIDNWL
GHLRDIHRLH NDELTNLDDQ ARFDRLCELN VIEQVANVSE SNIVQEAWAR GQEVAIHGWI
YGITNGLLTD LDVTVDRETF LGQ