Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1642 |
Symbol | |
ID | 4603893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2008318 |
End bp | 2008929 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639781005 |
Product | carbonate dehydratase |
Protein accession | YP_927518 |
Protein GI | 119774778 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0288] Carbonic anhydrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00101631 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.513692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAC TCAAACCCTT GTTCGACAAT AACCGTCGAT GGGCACAGCG CATCCTGCAG GAAAACCCGG GCTTTTTCGA AACCCTGGCC AAGCAGCAAA ACCCCGAATA CCTGTGGATT GGTTGCTCCG ATAGCCGAGT TCCCTCCAAT CAAATCATTG ACTTGCTGCC CGGAGAGGTC TTTGTTCACC GTAATATCGC CAACATGGTG ATCCACACCG ACCTCAACTG TCTGTCGGTG CTTCAGTACG CAGTGGACGT GCTGCAGGTG AAACACATCA TGGTGGTGGG CCATTACGGC TGCGGCGGCG TCCGTGCCGC CATGGGCAGC GCTCGCCTTG GCCTTATCGA CAACTGGCTG GGTCATCTTC GTGATATACA TCGCCTGCAC AACGATGAGC TGACAAACCT TGACGATCAG GCACGCTTTG ACCGCCTGTG CGAGCTCAAT GTGATTGAGC AGGTGGCCAA TGTCAGCGAA TCAAACATAG TCCAGGAAGC CTGGGCCCGC GGTCAGGAAG TCGCCATCCA CGGTTGGATA TATGGCATCA CCAACGGACT GCTCACCGAC CTGGATGTTA CCGTCGACCG GGAGACCTTT CTTGGCCAAT AA
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Protein sequence | MKLLKPLFDN NRRWAQRILQ ENPGFFETLA KQQNPEYLWI GCSDSRVPSN QIIDLLPGEV FVHRNIANMV IHTDLNCLSV LQYAVDVLQV KHIMVVGHYG CGGVRAAMGS ARLGLIDNWL GHLRDIHRLH NDELTNLDDQ ARFDRLCELN VIEQVANVSE SNIVQEAWAR GQEVAIHGWI YGITNGLLTD LDVTVDRETF LGQ
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