| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1640 |
|---|
| Symbol | |
|---|
| ID | 4603891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 2005890 |
|---|
| End bp | 2006960 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639781003 |
|---|
| Product | alcohol dehydrogenase, iron-containing |
|---|
| Protein accession | YP_927516 |
|---|
| Protein GI | 119774776 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000263255 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.217224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCA GAAATTTCAA AGCTGTACCT AAGATGATCT TCGGTCGCGG CGCATTCAAC
CAGCTCGACG AAGTACTGGC CGCCGAGCGC AAGAACGATG ACGATTTCGT GGTATTTCTG
GTGGACGACG TGCACCAGGG CAAACCACTG GAAAGCCGTA TTCCGGTCAA GCCACAAGAC
AAGCTGATTT GGGTAAACGT GGACGATGAG CCTTCAACCG AACAGGTTGA TGCCCTCACC
GAGGAAGTAC AGGCCTTCAA CAGCAAGCTG CCCGTCAGCG TAGTGGGTCT GGGTGGCGGT
TCTACCATGG ATTTGGCCAA GGCCGTATCC CTGATGCTGA CCAACCCAGG TGGCTCTGCC
ATGTACCAGG GCTGGGATCT GATTAAGGTG GCTGCCGTTC ATCACATTGG TATTCCTACC
ATTTCCGGTA CCGGTGCCGA AGCCTCACGT ACTGCGGTAC TGTGCGGCCC TGAGCGCAAG
CTGGGTCTTA ACTCAGACTT CACCGTATTC GACCAGATCA TCATGGATCC CGAGCTGATT
GCCGGTGTAC CTGTTGATCA GTGGTTCTAC ACAGGGATGG ATTGCTACAT CCACTGCATC
GAGTCGCTGG AAGGCACTTA CCTGAACGAA TATTCCAAGG CCTTCGGTGA AAAATCACTG
GAGCTGTGCC GTCAAGTGTA CCTGGATGAC CACCCAGAAA AAGACGACAA GCTGATGATG
GCCTCATACA TGGGCGGCAT GTCCATCGCG TACAGCCAGG TGGGTGCCTG TCACGCCCTG
TCTTATGGCC TGGGTTACGT GCTGGGCTAC CACCACGGTA TCGGCAACTG TATCGCCTTT
AACGTGCTGG AAGAGTTCTA CCCAGAGGGT GTGGCCGAAT TCCGCACCAT GATGGAAAAA
CACAATATCA CCCTGCCAAA AGACATCTGC AAAGATTTGC CAGATGAAAC CATTGCTCGT
ATGGTTAAAG TGGCCAAGAG CCTCGGCCCA CTGTGGCACA ACGTGTACGG CGACGGTTGG
GAAGAAAAAG TGACCGACGA GATGCTGACC AAACTGTACC GTCGCATCTA G
|
|---|
| Protein sequence | MKFRNFKAVP KMIFGRGAFN QLDEVLAAER KNDDDFVVFL VDDVHQGKPL ESRIPVKPQD
KLIWVNVDDE PSTEQVDALT EEVQAFNSKL PVSVVGLGGG STMDLAKAVS LMLTNPGGSA
MYQGWDLIKV AAVHHIGIPT ISGTGAEASR TAVLCGPERK LGLNSDFTVF DQIIMDPELI
AGVPVDQWFY TGMDCYIHCI ESLEGTYLNE YSKAFGEKSL ELCRQVYLDD HPEKDDKLMM
ASYMGGMSIA YSQVGACHAL SYGLGYVLGY HHGIGNCIAF NVLEEFYPEG VAEFRTMMEK
HNITLPKDIC KDLPDETIAR MVKVAKSLGP LWHNVYGDGW EEKVTDEMLT KLYRRI
|
|---|
| |