Gene Sama_1637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1637 
Symbol 
ID4606038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2004252 
End bp2004674 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content53% 
IMG OID639781000 
Productacetyltransferase 
Protein accessionYP_927513 
Protein GI119774773 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.240715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.189465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTGA TGGACGGTGT AACCCTGATG ACCACAGCGC CGACCCCGGC GTCCCTGATA 
GCATTAAGAC AACGGGTTGG CTGGACCAGT CCCGCAGTGA ATGTGGTAGA GCAGAGTCTG
GCAAATTCAT TATTCATCGT TTGCGCCTAT GATGGCGCCA GACTGGTGGG TACCGGCCGT
ATTGTGGGTG ATGGCGCCAT GTATTTTTAT CTTCAGGACC TGCTGGTTGA TCCTGAATAT
CAGCGACAGG GAATAGGTCG GCTGCTGATG GAAGAGATTG AGTCATTCCT GCGCCAAAGG
GCGCAGCCCG GTGCCACCAT TGGGTTGTTT GCTGCCCATG GCAAAGAGGA TTTTTACCAA
GCATTTGGGT ATCAACGCAG GACAGGGCAA GTTCTGGGAA TGGGCATGTG CAAATTTGTG
TGA
 
Protein sequence
MQVMDGVTLM TTAPTPASLI ALRQRVGWTS PAVNVVEQSL ANSLFIVCAY DGARLVGTGR 
IVGDGAMYFY LQDLLVDPEY QRQGIGRLLM EEIESFLRQR AQPGATIGLF AAHGKEDFYQ
AFGYQRRTGQ VLGMGMCKFV