| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1630 |
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| Symbol | |
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| ID | 4603882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1994829 |
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| End bp | 1995719 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780994 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_927507 |
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| Protein GI | 119774767 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.48911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGTTC ATGACGTCGA TTTAAAACTG CTGAGGATAT TTGTCGCCAT CGTGGAGTGC
GGCGGCCTGT CGGCAGCCGA ATCACGGCTC AATATTGGCC GCTCCACCAT CAGCGCTCAC
CTGTCAGATT TGGAGGTGCG CCTCGGCATT AAACTGTGCA AGCGTGGCCG CAGCGGCTTT
GAACTGACAG AGTCTGGTCG GGTGACCTAT CAGGCATCGC TTGAGCTGTT GCAGCACTGC
GATGCCTTTG CATCCACCGT AGCCAGTGCC AAGCAGGAGC TGGCCGGCCG GGTCAGCATT
GCGGTGATTG ATACCCTGGT AAGTGACCCG CGCTGCGACA TTGCCGGGGT GATTGCGGCG
CTCAAGGCTA AAAGCAACCA TATCCAGTTT GATATCAACG TGTGTGAGGC GCGGGAGGTA
GAAACCTCGG TGGTCAACGG CCGCTCTTTG GTCGGCATTG GGGTCAGTCG TCATCATCTG
CGCGGGCTCG ATTACCATCC GCTGCATAAT GAAACCAACT ACCTGTATTG CGGTGTGGGT
CATCCCCTGT TTGATTGCCT GCCAGACAAG GTGCCAGCGC TGCTGCAAAA CGCCGAGGTA
ATCACCAGTA ACTACATGCG CGACAAAGAG ATGCGTAACG ACGATTTGAA CTATCAGAAC
ACCGCCACCG CCTACCACGA TGAAGGCATT GCTCATCTCA TCCTCTCGGG CAAGTTTATC
GGCTACCTGC CGGAGCACTA CGCCAGCCAC TGGGTCGATA AGGGCCTTTT CAAAGCGATT
TTGCCCGAGA AATACTCCTA CCAAATTCCT GTGGTGCTCA TCACGTCAAA GAGCAATGCC
GCAACGCCGC TGGCAACGGC GCTGATTGAT GAGATAAAAC GCCGTCATTA A
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| Protein sequence | MQVHDVDLKL LRIFVAIVEC GGLSAAESRL NIGRSTISAH LSDLEVRLGI KLCKRGRSGF
ELTESGRVTY QASLELLQHC DAFASTVASA KQELAGRVSI AVIDTLVSDP RCDIAGVIAA
LKAKSNHIQF DINVCEAREV ETSVVNGRSL VGIGVSRHHL RGLDYHPLHN ETNYLYCGVG
HPLFDCLPDK VPALLQNAEV ITSNYMRDKE MRNDDLNYQN TATAYHDEGI AHLILSGKFI
GYLPEHYASH WVDKGLFKAI LPEKYSYQIP VVLITSKSNA ATPLATALID EIKRRH
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