| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1608 |
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| Symbol | uvrC |
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| ID | 4603860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1965437 |
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| End bp | 1967257 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780969 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_927485 |
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| Protein GI | 119774745 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00130294 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTGACC ATAAAGCCTT TTTAAAAACG GTTTCCAGTG CCAGTGGCGT CTACCGCATG
TATGACGCTG CGGCTGAGGT TATCTATGTA GGAAAGGCAA AAGATCTGAA AAAGCGGCTG
TCGTCCTATT TCCGGACGAA TCTGCCCAAT ATCAAGACCC AGGCTTTGGT TTCCAACATC
GCCAACATCG ATGTCACCCT TACCCACAGT GAGACCGAAG CATTAATCCT GGAAAATGAT
TACATCAAGC AGTACATGCC CAAATACAAT GTGCTGCTCA GAGATGATAA ATCCTACCCC
TATATTTTGC TCAGTGGCCA TAAACATCCC AGACTGGCCT ACCACAGAGG CGCCCAGCGG
GAGAAAGGGG AGTACTTTGG GCCGTACCCC AATGGCGGCG CCGTGCGTGA AAGCCTCAAT
CTGATGCAAA AGCTGTTTCC CATCCGCCAG TGTGAAGATG CCTACTACCG CGCCCGCTCA
CGTCCCTGTC TGCAGTATCA AATTGGCCGC TGTTCGGCGC CCTGCGTCGG CAAAATTTCC
GATGAGGACT ACGACGAGCA GGTAAGGCTG GCAACCCTGT TCCTCAGAGG AAAGGACCAA
CAGGTTATCG CCAGTTTGGT CGGCAAAATG GAAGCCGCAG CACTGGCGAT GGAATACGAG
GCTGCAGCGC GCTATCGTGA CCAAATTCAG GCGCTGCGCA AGGTTGCTGA GCAGCAAAAT
GTCTCAGGAC AGCAGGGGGA TATGGATGTT ATCGGGGTGA ATTACGCCTC AGGTATTGCC
TGTTTTCATA TCCTGTTTAT CCGCGAAGGC AAGATTTTTG GCAGTCGCAG TTATTTCCCT
GCGGTGCCTG ATGCCACTGA GCTTGGCGAA GTGTTACGTG CCTTTATGCT GCAATTCTAT
TTGGGAAATG AGGCGCACCG CAGCATTCCC AAGGAAGTCT TACTTGGCGA AGAGTTCGAA
GATCTCCATG AGCTTGAAGC CGCCATGCAG GATTCACTCG GTCACAGGCT TGAAATCAAA
ACCAAGGTGA GGGCAGATAG GGCCGCGTTT TTACGCCTGG CCAATACCAA TGCCGCCAAT
GCCGTTGTGA CCAAGCTGGC ACATAAAAGC ACGGTTGAGC AGCGTATGGA ACTCCTGGAG
GAAGTGCTGG GCCTTGGCGC ACCCATACAA CGCATGGAGT GTTTTGATAT CAGTCACACC
ATGGGGGAAA GCACCGTTGC CTCCTGCGTG GTCTTTAACC GTGAAGGCCC CAATAAGGGG
GAGTATCGTC GCTACAATAT AAGCGGCATT ACAGGGGGGG ACGACTACGC GGCCATGGCT
CAGGCGCTTT CCCGTCGGTT TGATAAGATT GAACGCACCG GCAAGGTGCC CGATGTGCTT
TTTATCGACG GCGGCCTGGG GCAGCTGCGA GCTGCCATGA CGATAGTCAA CGACAAGTTT
GCCGAACTTG ACCGGCAACC GCTGCTTGTT GGGGTTGCAA AAGGGGAGAG CAGAAAGCCT
GGGCTTGAAA CCCTCATCTT TGGTGGCAGT GAGGCCGAGT TTTCGTTGGA GTCCGATAAT
CCCGCGCTGC ACCTCATCCA GCATATTCGC GATGAGTCCC ACCGCTTTGC CATTACCGGC
CACAGGGCGA AAAGGCAGCA AACCCGAAAT ACCTCGACTC TGGAGTCAAT TCCCGGAATT
GGTCCCAAAC GACGCAAGGC ACTTCTGCAA TATCTCGGCG GATTACAGCA AGTTAAAAAT
GCCAGTGTCG CCGAGCTTGC GAAGGTGCCC GGGATCAGCG CAGAAATGGC GCAAACTATC
CACGACGCAT TGCGGGGGTG A
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| Protein sequence | MFDHKAFLKT VSSASGVYRM YDAAAEVIYV GKAKDLKKRL SSYFRTNLPN IKTQALVSNI
ANIDVTLTHS ETEALILEND YIKQYMPKYN VLLRDDKSYP YILLSGHKHP RLAYHRGAQR
EKGEYFGPYP NGGAVRESLN LMQKLFPIRQ CEDAYYRARS RPCLQYQIGR CSAPCVGKIS
DEDYDEQVRL ATLFLRGKDQ QVIASLVGKM EAAALAMEYE AAARYRDQIQ ALRKVAEQQN
VSGQQGDMDV IGVNYASGIA CFHILFIREG KIFGSRSYFP AVPDATELGE VLRAFMLQFY
LGNEAHRSIP KEVLLGEEFE DLHELEAAMQ DSLGHRLEIK TKVRADRAAF LRLANTNAAN
AVVTKLAHKS TVEQRMELLE EVLGLGAPIQ RMECFDISHT MGESTVASCV VFNREGPNKG
EYRRYNISGI TGGDDYAAMA QALSRRFDKI ERTGKVPDVL FIDGGLGQLR AAMTIVNDKF
AELDRQPLLV GVAKGESRKP GLETLIFGGS EAEFSLESDN PALHLIQHIR DESHRFAITG
HRAKRQQTRN TSTLESIPGI GPKRRKALLQ YLGGLQQVKN ASVAELAKVP GISAEMAQTI
HDALRG
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