| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1606 |
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| Symbol | |
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| ID | 4603858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1962014 |
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| End bp | 1963744 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780965 |
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| Product | ATP-dependent protease |
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| Protein accession | YP_927483 |
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| Protein GI | 119774743 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000440956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCAT CTTTGATTGC CGCTGAGCGG CTTAGCCCTG CCTTTCATCT TCCCACTGGC
CTGCCAGACA ATCCCGGTCT CGGACATTTG CTGCTATGTC AGGACAGACT CCTTGACGCT
TTCACCCTGG CAAGTCAAAT TCCATCCCAG CACTTATTTT TGGCCGATTT TCCAGGCGTG
CACCGGGAGT CATTGTTTAA AGCGCTGGCA CAAGCGGCAC CAGTCCCGCC AAGAGAGCTG
GTTGCGCGAC GTCACGAAGC CGGCACTCAA CTGGTTTGGG AAACCGCCCG CCAAGGCGAG
CACGGCTCAC TCGCCCGCGA GCATGGATTT TTCACCGTGC TGGGGCACCA GATAAAGCGC
GCCGATTTAT TGGGCAACAT GGTTGAAGAC AGCAACGGCA AGGCACAATA CCGCCCCGGA
GCCCTCGCCA GTTATCCCTA TATCTTTATC TGCGTAGAAG CACTCTATCG CCGGGAAGGC
CTGTGGCAAG TCTTGTTGGA CGTGCTCGAC AAAGGCTACT ACCGCGTTGG TAAAGACATG
AACATCCCGC TGCAATCGAC CATCATCCTG GTTGGCAGTG CACTGCAGTA TTCTGAACTG
CGCGCCCATG ACAGCAGCTT CAGCCGCCAT TTTCCCCTGC TGGGTGAAAT GGCCCACGAG
CTCAATCTGA CGGTCAAGTC CGAAAAAGAG TATGGTCTTT GGTTAAAAGC CCTCGCTCAC
GAAGGCGGCT ACCAACTTGA CGACTCCGCA ATGGCTCCCC TCTTCAACTT TGCAGCAAGA
GAATGTGAAC ATCAGCAGCG TCTGTCACTC TCTGGTCAGG ACTTGGTACA ACTGTTCGCC
CAGGCCGCAG TATATGGTCG CTCTGGCAGA CTGGATGCGA ATGCCATCGA CAAGGCCATT
AAGCAACTTA CCCGCCGTCA CAACAGCTCA GAACGCTTCT CTGCCCAGAG TTTCGATGAC
AGTTTTATCA ACCTCCCCAC TGACGGAGAA ATGATTGGCC AGATTAATGG CCTCACTGTT
ATCGACAGTG TTGACTATGC CTATGGTGAG CCAGCACGAA TAACCGCAAC TGTGCACTAT
GGTGACGGTG AAGTCGCCGA TATTGAACGC AAATCAGAAC TCGGCGGCAA TATCCATGCG
AAAGGCATGA TGATCCTTTC AGCTTGCCTG TATCGTATTT TTGGTCGTGA TGCACCGCTT
CACCTGAATG CCAACATAGT ATTCGAGCAG TCATATCAGG AGATTGATGG CGATAGCGCC
TCCCTTGCGG AGTATTGCTG TTTAATGTCT GCTATTGCAG AGCAGCCAAT AAAACAATCA
CTTGCCGTAA CAGGTGCGCT CGACCAGTTT GGCAATGTGC AGGCAATTGG CGGTGTTAAC
GAGAAAATTG AAGGCTTTTT CAATCTGTGT GAACGTCGAG GTCTCACGGG CGAACAAGGG
GTCATCATCC CCAGGGCCAA CATGTTGCAG CTGAACCTCG ATAAAAAAGT GATAGACGCC
GTATCCAAGG GACTGTTCCA CATCTATCAG GTCGCGCACA TGGACGAAGC GGTAGAGATG
TTGATGGCGC TACCTGCTGG CAAGGCCGAT GAAGAGCATA ACTTCCCTGA GAATACGCTC
TATGGCCTGG TTCAGACCAG ATTGGATAAA CTGGCGGGTG ATGAGCCTCT GGACGAACCA
GAGGGGTTCT TTGCTTCTCT GCTCGCAAAA TGGCCATTTT CCAGAGCCTA A
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| Protein sequence | MHPSLIAAER LSPAFHLPTG LPDNPGLGHL LLCQDRLLDA FTLASQIPSQ HLFLADFPGV
HRESLFKALA QAAPVPPREL VARRHEAGTQ LVWETARQGE HGSLAREHGF FTVLGHQIKR
ADLLGNMVED SNGKAQYRPG ALASYPYIFI CVEALYRREG LWQVLLDVLD KGYYRVGKDM
NIPLQSTIIL VGSALQYSEL RAHDSSFSRH FPLLGEMAHE LNLTVKSEKE YGLWLKALAH
EGGYQLDDSA MAPLFNFAAR ECEHQQRLSL SGQDLVQLFA QAAVYGRSGR LDANAIDKAI
KQLTRRHNSS ERFSAQSFDD SFINLPTDGE MIGQINGLTV IDSVDYAYGE PARITATVHY
GDGEVADIER KSELGGNIHA KGMMILSACL YRIFGRDAPL HLNANIVFEQ SYQEIDGDSA
SLAEYCCLMS AIAEQPIKQS LAVTGALDQF GNVQAIGGVN EKIEGFFNLC ERRGLTGEQG
VIIPRANMLQ LNLDKKVIDA VSKGLFHIYQ VAHMDEAVEM LMALPAGKAD EEHNFPENTL
YGLVQTRLDK LAGDEPLDEP EGFFASLLAK WPFSRA
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