Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1605 |
Symbol | |
ID | 4603857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1961420 |
End bp | 1961935 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639780964 |
Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
Protein accession | YP_927482 |
Protein GI | 119774742 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000126074 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAG CAAACAGCTA CACCAAAGAA GAACTGATCG CCTGTGGCCA TGGCGAGCTT CTTGGCAAAA ATTCTCCCCG TCTGCCCGTA GACAACATGC TGATGATCGA TCGCGTCGTA ACCATTAACG ACAATGGCGG CACCTTCGGC AAAGGAGAAA TCGTAGCAGA GCTGGATATT GATCCGGATC TCTGGTTCTT TGGTTGCCAC TTCGTAGAAG ACCCCGTAAT GCCAGGTTGT CTTGGCCTCG ATGCCATGTG GCAGCTGGTC GGCTTCTTCC TTGCGTGGGA AGGGGCTCAG GGCAAAGGTC GTGCACTGGG TGTAGGTGAA GTGAAATTTA CCGGTCAGGT ACTGCCAGGT GCCAAGAAAG TCACTTACAA GCTCAACATC AAGCGCACCA TCCACCGCAA GCTGGTGATG GGTATTGCCG ATGCGACCCT GGAAGTGGAC GGTCGTGAAA TCTATTCCGC CACCGATTTG AAAGTGGGCG TGTTTACTGA CACCTCTACC TTCTGA
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Protein sequence | MTKANSYTKE ELIACGHGEL LGKNSPRLPV DNMLMIDRVV TINDNGGTFG KGEIVAELDI DPDLWFFGCH FVEDPVMPGC LGLDAMWQLV GFFLAWEGAQ GKGRALGVGE VKFTGQVLPG AKKVTYKLNI KRTIHRKLVM GIADATLEVD GREIYSATDL KVGVFTDTST F
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