Gene Sama_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1605 
Symbol 
ID4603857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1961420 
End bp1961935 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content53% 
IMG OID639780964 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_927482 
Protein GI119774742 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000126074 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAG CAAACAGCTA CACCAAAGAA GAACTGATCG CCTGTGGCCA TGGCGAGCTT 
CTTGGCAAAA ATTCTCCCCG TCTGCCCGTA GACAACATGC TGATGATCGA TCGCGTCGTA
ACCATTAACG ACAATGGCGG CACCTTCGGC AAAGGAGAAA TCGTAGCAGA GCTGGATATT
GATCCGGATC TCTGGTTCTT TGGTTGCCAC TTCGTAGAAG ACCCCGTAAT GCCAGGTTGT
CTTGGCCTCG ATGCCATGTG GCAGCTGGTC GGCTTCTTCC TTGCGTGGGA AGGGGCTCAG
GGCAAAGGTC GTGCACTGGG TGTAGGTGAA GTGAAATTTA CCGGTCAGGT ACTGCCAGGT
GCCAAGAAAG TCACTTACAA GCTCAACATC AAGCGCACCA TCCACCGCAA GCTGGTGATG
GGTATTGCCG ATGCGACCCT GGAAGTGGAC GGTCGTGAAA TCTATTCCGC CACCGATTTG
AAAGTGGGCG TGTTTACTGA CACCTCTACC TTCTGA
 
Protein sequence
MTKANSYTKE ELIACGHGEL LGKNSPRLPV DNMLMIDRVV TINDNGGTFG KGEIVAELDI 
DPDLWFFGCH FVEDPVMPGC LGLDAMWQLV GFFLAWEGAQ GKGRALGVGE VKFTGQVLPG
AKKVTYKLNI KRTIHRKLVM GIADATLEVD GREIYSATDL KVGVFTDTST F