Gene Sama_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1604 
Symbol 
ID4603856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1961055 
End bp1961231 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content52% 
IMG OID639780963 
Productribosome modulation factor 
Protein accessionYP_927481 
Protein GI119774741 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3130] Ribosome modulation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000482252 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAC AAAAAAGAGA TCGCTTGGAC AGAGCTTTTG CTAAGGGCTT TCAGGCCGGA 
GTGGGTGGTC GTTCAAAGGA GATGTGCCCC TATTCCAATC TTGATTCGCG CTCACAATGG
CTGGGAGGCT GGCGCGAGGG GGTAGATGGC CGAATAACCG GACTCTTTAC CAAGTAA
 
Protein sequence
MKRQKRDRLD RAFAKGFQAG VGGRSKEMCP YSNLDSRSQW LGGWREGVDG RITGLFTK