Gene Sama_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1572 
Symbol 
ID4603824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1916605 
End bp1916964 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content47% 
IMG OID639780928 
Producthypothetical protein 
Protein accessionYP_927449 
Protein GI119774709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000110189 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA AATGGATGTT TTTGATGCTG GCGACAGCAC TCAGCACAGG TGCGACGGCC 
AAAAACGACA AGGACCATAA AGAGCACAAG GATCATAAAG ACAAGTCCTA CAATGAATAC
CGCTCAGATG GGAAGGACTT GCCGCCCGGT CTGCAAAAGA AGGTCGCCAA GGGTGAACCT
CTGCCCCCTG GTTGGCAGAA AAAGTATCAT CGCGGCGATA TTCTGGATCT GGACATTTAC
GAACGCGGTG TGCGGGTTGG CCCTATCGGA ATTGGCGGTG AAGTGACCAT ACGTATCGAT
GATTCTTTGT TTAAAATTCA CGATAAGACC CGCAAAATTA TCGATATTAT CAACGAGTAA
 
Protein sequence
MKNKWMFLML ATALSTGATA KNDKDHKEHK DHKDKSYNEY RSDGKDLPPG LQKKVAKGEP 
LPPGWQKKYH RGDILDLDIY ERGVRVGPIG IGGEVTIRID DSLFKIHDKT RKIIDIINE