Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1572 |
Symbol | |
ID | 4603824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1916605 |
End bp | 1916964 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639780928 |
Product | hypothetical protein |
Protein accession | YP_927449 |
Protein GI | 119774709 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000110189 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAACA AATGGATGTT TTTGATGCTG GCGACAGCAC TCAGCACAGG TGCGACGGCC AAAAACGACA AGGACCATAA AGAGCACAAG GATCATAAAG ACAAGTCCTA CAATGAATAC CGCTCAGATG GGAAGGACTT GCCGCCCGGT CTGCAAAAGA AGGTCGCCAA GGGTGAACCT CTGCCCCCTG GTTGGCAGAA AAAGTATCAT CGCGGCGATA TTCTGGATCT GGACATTTAC GAACGCGGTG TGCGGGTTGG CCCTATCGGA ATTGGCGGTG AAGTGACCAT ACGTATCGAT GATTCTTTGT TTAAAATTCA CGATAAGACC CGCAAAATTA TCGATATTAT CAACGAGTAA
|
Protein sequence | MKNKWMFLML ATALSTGATA KNDKDHKEHK DHKDKSYNEY RSDGKDLPPG LQKKVAKGEP LPPGWQKKYH RGDILDLDIY ERGVRVGPIG IGGEVTIRID DSLFKIHDKT RKIIDIINE
|
| |