Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1571 |
Symbol | |
ID | 4603823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1915710 |
End bp | 1916504 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639780927 |
Product | hypothetical protein |
Protein accession | YP_927448 |
Protein GI | 119774708 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.005738 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGAC GTTGTCACGA AGTGGACTAT GAAATTCGCG GCGAAAGCAT GCAGCTGGTG GAAGTGGAGC TGGATCCCGG TGAAACCGTA ATTGCCGAGG CCGGTGCCAT GACTTACATG GAAGAGGGCA TTCAGTTTGA GGCCCGCATG GGTGATGGCT CCCAGCCCGA ATCCGGCTTT TTCGGCGCCC TGATGGGCGC TGGCAAGCGT ATGCTTACCG GTGAGAGCCT GTTTATGACC CACTTTACCA ACCAGGGGCA TGGTAAGCGT AGGGTGGCGT TTTCAGCACC TTACCCCGGT ACCTTGCTGG CGCTGGATAT GGCCGAGCTT GGCGGCGAGC TGATTTTGCA AAAAGACAGT TTCCTCGCAG CAGCCTTGGG AACCCAAATC ACCATGACCT TTAACAAGCG CCTGGGTACC GGTTTCTTTG GAGGTGAAGG TTTTATCATG CAAAAGCTCA AGGGTGATGG CATGGCCTTT GTTCACGCCG GTGGCACCCT TATCAAGAAG GAACTCAAGG GCGAGACGTT GCGGGTGGAT ACCGGCTGTT TGGTGGGCTT TACCCCCGGC ATCGATTACG ACATTCAGCG GGCCGGCTCG CTTAAGTCCA TGGTATTTGG TGGTGAAGGT CTGTTTTTGG CTACCCTCAG TGGTCATGGC ACTGTGTGGC TGCAAAGCCT GCCATTCTCC CGTATGGCCG ATCGTATTAT CGCCCATGCG CCGTCGGCGG GTGGTTCCAG CCGTGGTGAA GGTTCGGTGC TTGGCGGCCT TGGCCGCATG CTGGATGGCG ATTGA
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Protein sequence | MMRRCHEVDY EIRGESMQLV EVELDPGETV IAEAGAMTYM EEGIQFEARM GDGSQPESGF FGALMGAGKR MLTGESLFMT HFTNQGHGKR RVAFSAPYPG TLLALDMAEL GGELILQKDS FLAAALGTQI TMTFNKRLGT GFFGGEGFIM QKLKGDGMAF VHAGGTLIKK ELKGETLRVD TGCLVGFTPG IDYDIQRAGS LKSMVFGGEG LFLATLSGHG TVWLQSLPFS RMADRIIAHA PSAGGSSRGE GSVLGGLGRM LDGD
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