| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1556 |
|---|
| Symbol | |
|---|
| ID | 4603808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 1896852 |
|---|
| End bp | 1897070 |
|---|
| Gene Length | 219 bp |
|---|
| Protein Length | 72 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639780912 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_927433 |
|---|
| Protein GI | 162139899 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3082] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000138593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTC AATCTAAATA CACCAATACC CAAGTGGAAA CCCTGATTGC AGAAGTACTG
GCCGTGCTGG AAAAACATCA GGCACCTACC GACCTTGGCC TGATGGTACT GGGCAACTGC
GTCAGCCACC TGCTGGAAAC CAAGGTGCCT GTTGCCAGCC GCGCCGCTGT GGCCGAGCAG
TTTGCCAAGG CACTGAATCA GTCAGTGTCA AAAGCCTGA
|
|---|
| Protein sequence | MAIQSKYTNT QVETLIAEVL AVLEKHQAPT DLGLMVLGNC VSHLLETKVP VASRAAVAEQ
FAKALNQSVS KA
|
|---|
| |