| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1555 |
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| Symbol | |
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| ID | 4605956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1894991 |
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| End bp | 1896775 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780911 |
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| Product | hypothetical protein |
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| Protein accession | YP_927432 |
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| Protein GI | 119774692 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3083] Predicted hydrolase of alkaline phosphatase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000146731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAGA GGAAACAACA ACTGGAGCGT GACAAGGTGT CACGACTGGT TAACTGGGGC
CACTGGTTTG CCCTGTTCAA TGGCTTTCTG GCACTGATTG TTGGCAGTCG TTATCTGGAA
ACCGTTGGTC TTCCCGAGAC CCTGACCGGC TGGGGCTATC TCGCATTGGC GAGCATAGGC
CAGTTTTCCT TTCTCGCCTT TTTACTCTAT CTGCTGCTGA TTTTTCCCGT CACCCTGCTG
CTGCCCTACT CAAAAATTTT GAGGGGGCTG GCAGCTACTG TGGCCACACT GGGCCTGTGT
ATTCTGCTCT ATGACACCAT AGTGTACGAC GATTACGGCG TGCACCTGTC ACCCTTTGCC
TTCGATGTGG CCTGGGCCGA TTTGCCTTCA CTGCTCAGCG GCACCTCCTA CATAGTAACG
CCCATAGGGA TTTTGGCGCT TGAGCTGACA GCGGCCAATT TCCTGTGGAA ACGCATTGTA
AAAATTGAAA AATGGCGCAT CGGTGGCAAA GTAGCGGCGG TATTGGGCAG CTGTTTTATC
GCCAGTCATC TGGTGCACAT TTGGGCCGAC GCCGCCAAGG TGAAAGACAT CACCCGCTAC
GATGATGCTT ATCCACTGTT TTATCCGGCT ACGGCAAAAA GCTTTATGGA GTCACACGGG
CTGGATTCCG CTGGCGGGCT CTCCAAACTC GGTGAGCAGC AGCAACTGGG TTATTCGCTT
GATGCCTTAA GCTGTAAACC TCAAAACAAG CCCAATGTGC TGATTGTGGC CGTCGATGCC
CTCAGGGCCG ATATGCTTAA TCCGCAAACC ATGCCATTTT TGAGCAACTA CGGCACTGAT
AATCAACTCT TTGATAAACA TTTAAGCGGT GGCAATCAGT TCCAAAGCGG CATGTTCTCC
CTGTTTTATG GTCTTCAGGG CAGTTACATG GCAGCACCCG ACTTCCAAAC CATATCACCT
TTGTTAACTC AGGGGTTTGT CACCTCGGGC TACGCCCTCA AGCGCTTTGG CCCTGCCTCA
AATGAAATCA ACCCACGTCC ACTGGCACTC TTTAACGACT TCGACGCCGC CCTGATGGAT
GACAGTGAAT CCCGTGCGCT GGCCGATATT CAAAGCCGTG AAGCCTTTGA GGAATGGCGC
AAGCAACAAA CGTCGCCCTG GTTTGCTCTG GTGAATCTGG GCGCGCCGGA AACTTACGAC
ACCCCGGTGG GCTTTGCAGG TATTGAAACC ATCAAGGCAC CTCAGGGTAT GGCACCGGCT
CAGCGGGTGC TCTTCAGCCA ATACCGTCAA TCGCTGCATT TTATTGATAG CGAACTTAAA
AGCCTTATCA ATCATCTGCC TGCCGATACC CTGGTGATAA TCACCGGAAC CAGTGGCAAG
GCCTTCACCA GCAATGAGGC GGAAGCCAGA CGGGATTTGT CCCCCCAAAG CGTTCGCGTG
CCTTTGATTA TTCACTGGCC GGGCGGTGAG CAGGCCCAGG TTAACTACAC CACCAGCCAT
CATGGTCTGG CCCCCACCCT GATGACTCGG GTGCTGGGCT GCACCAATCC CATTACAGAC
TACAGCGCAG GACGCCAACT GCTGATGCCA AGCGAGCAGC CCTGGGTGTA TGTGGGTGAT
AACCGATTCT TCGCCATTTA TCAGGATGAT GAAATCACGG TAATCGACCG CCATGGCAAA
TACGATATCT ACAGCAGTGA TTTTAAAACC CGATTAAACA AAAAATTAAG TGCCCCGGAT
CTTATCCAGG TTATGCGTGA AGGCAGGCGA CTTTATCACC AGTAA
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| Protein sequence | MVERKQQLER DKVSRLVNWG HWFALFNGFL ALIVGSRYLE TVGLPETLTG WGYLALASIG
QFSFLAFLLY LLLIFPVTLL LPYSKILRGL AATVATLGLC ILLYDTIVYD DYGVHLSPFA
FDVAWADLPS LLSGTSYIVT PIGILALELT AANFLWKRIV KIEKWRIGGK VAAVLGSCFI
ASHLVHIWAD AAKVKDITRY DDAYPLFYPA TAKSFMESHG LDSAGGLSKL GEQQQLGYSL
DALSCKPQNK PNVLIVAVDA LRADMLNPQT MPFLSNYGTD NQLFDKHLSG GNQFQSGMFS
LFYGLQGSYM AAPDFQTISP LLTQGFVTSG YALKRFGPAS NEINPRPLAL FNDFDAALMD
DSESRALADI QSREAFEEWR KQQTSPWFAL VNLGAPETYD TPVGFAGIET IKAPQGMAPA
QRVLFSQYRQ SLHFIDSELK SLINHLPADT LVIITGTSGK AFTSNEAEAR RDLSPQSVRV
PLIIHWPGGE QAQVNYTTSH HGLAPTLMTR VLGCTNPITD YSAGRQLLMP SEQPWVYVGD
NRFFAIYQDD EITVIDRHGK YDIYSSDFKT RLNKKLSAPD LIQVMREGRR LYHQ
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