| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1501 |
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| Symbol | |
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| ID | 4603753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1819370 |
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| End bp | 1820284 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780851 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_927378 |
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| Protein GI | 119774638 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA CCCTCAAACA AATGTCGGTT TTTGATGCTG TCGCCAGTCT CGAAAGTGTG
TCCGGCGCGG CCCGTAAACT GTCCATGACC CAGTCCGCCG TCAGTATGTC GCTGCAGCAG
CTGGAAAGCT TGCTCGGCAG GCCGCTCTTT ATCCGTCAGG GAAACCGATT GATGTTGAGC
CATTGGGGAC ACTGGCTCAG ACCCCGCGCC CGCAAGCTAC TCGCCGATGC CCAGCAAATC
GCCATGGGGC TGCACGATCA GCACCTCCTA TCCGGCAGTT TATCCATGGG GGCCAGCCAA
ACCGCGGCGG AACACCTGCT TGGGGATCTC ATCAGCCGCC TTGATAGCGA CTTTCCACAA
ATCCATATTG AGCTGATGGT CGAAAACACC GAAAACGTCA TCACGGCGGT GCAGGAATAT
GAGGTGGACT TTGGCATCAT CGAAGGGCGC AGCGACGATG CCCATTTGGT GTTGGAGCCC
TGGCTTGATG ATCATCTTGT GGTGATTGCC GCGCCCCACC ATCCCTACGG CAAGTATGGC
AATGTCAGCC TGTCACAGCT GGAGCAAGCT AAATGGGTAC TGCGGGAGCA AGGCGCCGGC
ACCCGCCGCA TTTTCGATGC CGCCATCCAT GGCAATCTCG ACAGATTAAA CGTATGGCGG
GAGTACGAGC AGGTACCTGT CCTGAAGGCG TTGGTAAAAA ATGGTCCCTA CCTCAGTGCA
CTGCCCTATC TGGATGTGGA GCGGGATGTG GCCGCCGGGC AACTCATTAT CCTGTCAACG
CCCAAACTGA ACATGAAGCG CCAGTTGTCT TTCGTATGGC GCGCCGATGC CACTGAAAAC
CCGCTGCGTG ACTGTGTGAT TTCGGAAGCA AAAAGGCTCG CGCGCCACAG GCACACGAGC
CAGGAGAAGA TCTGA
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| Protein sequence | MKYTLKQMSV FDAVASLESV SGAARKLSMT QSAVSMSLQQ LESLLGRPLF IRQGNRLMLS
HWGHWLRPRA RKLLADAQQI AMGLHDQHLL SGSLSMGASQ TAAEHLLGDL ISRLDSDFPQ
IHIELMVENT ENVITAVQEY EVDFGIIEGR SDDAHLVLEP WLDDHLVVIA APHHPYGKYG
NVSLSQLEQA KWVLREQGAG TRRIFDAAIH GNLDRLNVWR EYEQVPVLKA LVKNGPYLSA
LPYLDVERDV AAGQLIILST PKLNMKRQLS FVWRADATEN PLRDCVISEA KRLARHRHTS
QEKI
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