Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1488 |
Symbol | |
ID | 4603740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1802387 |
End bp | 1803274 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639780838 |
Product | hypothetical protein |
Protein accession | YP_927365 |
Protein GI | 119774625 |
COG category | [R] General function prediction only |
COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.246079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATAT TACTGACAGG CGGCACAGGT TTTATAGGTC GGGCACTGGT CAGTGCCCTG TCTGAACATC AACTCACCAT CCTCACCCGG GACACAGGCG CCGCAGCTGA GTTATTGGGC GAGCAGCACC ATTACCTGCG CTCCCTCGAT AAACTGGAAA ACCTCGATGG TTTCGATGCC GTCATCAACC TCGCAGGCGA ACCCATAGTC GGTAAACGCT GGAGCGACGC CCAGAAAAAA CAGCTCTGCC ACAGTCGCTG GGATCTGACT GCCTTGCTCA CCGGTCTTAT CCAGCAAAGC AGCGAACCGC CTGCGGTGTT TATCAGCGGT TCGGCTATCG GCTATTACGG TGCCCAGGGC AGCCAACCGC TCACCGAATC TTCAAGTCCC CACAGTGAAT TTACCCACAT GCTCTGTGAA AAATGGGAGC AACTGGCGCT GGACGCAACA AGCGACGTGA CCCGGGTGTG TATTCTGCGC ACCGGTATTG TGCTTGGAAA ACACGGCGGC GCCCTGGCCA AGATGTTGCC CCCCTTCAAA CTCGGTTTGG GTGGCCCCAT TGGCAGTGGT CAACAGGGCA TGAGCTGGAT CCATTTGGCC GATATGATTG GCCTGATACG TTTCCTGCTA ATCAACCCCA AATGCAGTGG CATCTTTAAC GCGACGGCTC CGAATCCCGT CAGCAACCGG GTCTTCTCCC AAACACTGGG CGAAGTGCTT CACCGCCCAG CCCTGCTCCC GGCACCCGCC TTTGCCCTCC ATGCCCTGCT GGGGGAAGCC GCCATCATGG TGCTTACCGG TCAGTACGTG CACCCGCAGA GGGCAATGGA GGCTGGGTTC GGCTTTCGCT TTCCCTATTT GCGTCAGGCG CTGGAAGATC TGCTTTAA
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Protein sequence | MNILLTGGTG FIGRALVSAL SEHQLTILTR DTGAAAELLG EQHHYLRSLD KLENLDGFDA VINLAGEPIV GKRWSDAQKK QLCHSRWDLT ALLTGLIQQS SEPPAVFISG SAIGYYGAQG SQPLTESSSP HSEFTHMLCE KWEQLALDAT SDVTRVCILR TGIVLGKHGG ALAKMLPPFK LGLGGPIGSG QQGMSWIHLA DMIGLIRFLL INPKCSGIFN ATAPNPVSNR VFSQTLGEVL HRPALLPAPA FALHALLGEA AIMVLTGQYV HPQRAMEAGF GFRFPYLRQA LEDLL
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