| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1451 |
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| Symbol | |
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| ID | 4603703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1761372 |
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| End bp | 1763564 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780801 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_927328 |
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| Protein GI | 119774588 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.322984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACTA AATCCCGTAT TCCCCTGTTT GCCCTGGCAC CCGTGTCTTT GGCCGTATGT
TCGTCGCTGG CCTTTGCCGC TGACAACAAG GCTACTGCTG AAGAAAACCC CATGGAAGTA
ATGCTGGTGA CGGCCGATTT TCGGGGGCTC TCGGTTGAAA AAATTCCCTC CAGCGTTACC
GTGATTGATG CCCAGAAGAT AGAAGACGAA GGCGCCCGGC ACTTTGAAGA TATTTTGGGT
TCTGTGGCCA ATTTCAACTG GTCCGGTGGT ACCTCCAGGC CCCGATATTT CCAGATCCGT
GGGGTAGGCG AGCAGGAGGA CTACAAGGGC GCGCCCAATT CCTCCGTTGG CTATTTGATT
GACGATATCG ACCTGTCAGG GCTGGGCATG GTGTCCAGCA TGTACGATCT GCAGCAAGTG
GAAGTGCTGC GTGGTCCTCA GGGTACCCGC TACGGCGCCA ACGCGCTGGC AGGCCTGATT
TATCTTAAGA GCAACGACCC CACTGAGCAG TTTGAACACG GTGCCCGGCT GAGTCTTGGC
AATGATAATC TTAAAACCTT CGCCGGTTTC AGCTCAGGTC CCATGATGGA GTCTGGGGAA
CTGCTGTACC GTGTTGCCAT TGAGCAGCAC CGTCAGGACG GTTTTCGTGA CAACCTGTAC
CTTGACCGTT CAGACACCAA CAAGCGTGAT GAACTGAGTT TCAGAACCAA GGTGCGCTGG
TATGCCAACG ACCATACCCA GGTAGACTTC ACCCTGATGC ACGCAGACTT TGACAATGGT
TACGATGCCT GGACTCTGGA TAACAATGGC TTTGATACCC TGACCGACAT GCCGGGCACT
GATGCCCAGC GCACCACGGG TGTGGGATTG AAGCTGTTGT ACGATGGCTT CGATAAGGCC
GAGTTGACCT CACTGACCAG CTTTGCCGGG ACTGACCATC ATCACGGTTA CGATGGCGAC
TGGGCTAACC CCGAATATTG GGCCGCACGC CAGTGCACCG ATGATTATGA TGTCAACGGT
AATGGCGACT ATGCTGACCT TTTACCCTGC GAATACGATT ACACCTGGGA CAAGCGTGGC
GATCGCAGCA CCGTATCCCA GGAGTTCCGT TTGGCCAGCA ACGAGGCGGG CAAGATTTGG
GGTGGCAGCA CCGCCTGGCT CGTTGGCCTG TATGGTATGC AGCTTAAAGA AGACAACGAC
CTGGCTTCTT TTTACAACGG TTGGCCAGAT GAAACACTAC GCTCCAGCTA CGAAGCGACC
AACCTCGCCA TCTTCGGTCA GCTCGACAGC GACCTGGGGC AGGAGATAAA CCTGTCGGTG
GGCCTGCGTC TTGAGCGTCG TGATGCCGAT TACAGCGATG ATGCAGGGGA TGCCTTTGAC
CCATCTGAAA CCATGTGGGG GGGCCATATT GCCATCGGCA AACAGCTGAA TGAGCAGCAT
AATCTCTATG GCCGCATTGC CCGCGGTTAC AAAGCGGGCG GTTTTAACAT GTCGCTGCCT
GCTGAGTTTG CCGATAAGAA GGAGTTCGAT ACTGAAGTCC TCTACAACTA CGAAATTGGC
CTTAAGTCCA GCTTCCTTGA AGGCAACTTC GACACCAATC TGGCGCTGTT CTTTATGGAC
AGACAAGATC AGCAGGTATC GGCATCCCAA CAGGATCCTG CCAAACCCCA GCGTTTCGTT
CTTTTTACCG AAAATGCCGG CAGTTCAACC AATTACGGTG CCGAGCTTGA TCTGAACTGG
TACGCCACCG ATAACCTGCA CTTCTACGGC AGCCTGGGCT ATCTCAAGGC CGAGTACGGT
GACTACAGCT ATCAGGATAA ATATGGCGGC CTGGTTGACC TCTCTGGCCG TGAGCTGGCC
CATGCACCCA ATTGGACCTG GTCACTGGGC ACCACCTGGC GTGCCGACTC AGGCTTTTTT
GTCAACCTCA ATGCCAATGG CAAGAGCAAG TTCTACTATT CAGACTCCAA TGACTCAGTT
TCCAAAGACT ATGGGGTGCT CAATGCCCGA GCGGGCTTCG AGGGCGATAT CTGGTCTGTC
TATGTTTGGG GCCGCAATCT GCTGGATGAA GAATACGGTG TGCGGGGCTT TTATTTCGGC
AATGAGCCGG ACAATGGCTG GGCGGACAAG CAATATATTC GCTTTGGCGA TCCCCGCGCC
TTTGGCCTGA CCCTGGATGT GCGTTTTCTG TAA
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| Protein sequence | MFTKSRIPLF ALAPVSLAVC SSLAFAADNK ATAEENPMEV MLVTADFRGL SVEKIPSSVT
VIDAQKIEDE GARHFEDILG SVANFNWSGG TSRPRYFQIR GVGEQEDYKG APNSSVGYLI
DDIDLSGLGM VSSMYDLQQV EVLRGPQGTR YGANALAGLI YLKSNDPTEQ FEHGARLSLG
NDNLKTFAGF SSGPMMESGE LLYRVAIEQH RQDGFRDNLY LDRSDTNKRD ELSFRTKVRW
YANDHTQVDF TLMHADFDNG YDAWTLDNNG FDTLTDMPGT DAQRTTGVGL KLLYDGFDKA
ELTSLTSFAG TDHHHGYDGD WANPEYWAAR QCTDDYDVNG NGDYADLLPC EYDYTWDKRG
DRSTVSQEFR LASNEAGKIW GGSTAWLVGL YGMQLKEDND LASFYNGWPD ETLRSSYEAT
NLAIFGQLDS DLGQEINLSV GLRLERRDAD YSDDAGDAFD PSETMWGGHI AIGKQLNEQH
NLYGRIARGY KAGGFNMSLP AEFADKKEFD TEVLYNYEIG LKSSFLEGNF DTNLALFFMD
RQDQQVSASQ QDPAKPQRFV LFTENAGSST NYGAELDLNW YATDNLHFYG SLGYLKAEYG
DYSYQDKYGG LVDLSGRELA HAPNWTWSLG TTWRADSGFF VNLNANGKSK FYYSDSNDSV
SKDYGVLNAR AGFEGDIWSV YVWGRNLLDE EYGVRGFYFG NEPDNGWADK QYIRFGDPRA
FGLTLDVRFL
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