Gene Sama_1441 details

Gene Information

• Locus tag: Sama_1441
• Symbol: bioD
• ID: 4603693
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella amazonensis SB2B
• Kingdom: Bacteria
• Replicon accession: NC_008700
• Strand: +
• Start bp: 1751443
• End bp: 1752135
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639780791
• Product: dithiobiotin synthetase
• Protein accession: YP_927318
• Protein GI: 119774578
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0132] Dethiobiotin synthetase
• TIGRFAM ID: [TIGR00347] dethiobiotin synthase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00254947
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATGTATT TTGTGACAGG GACCGATACA GACTGTGGTA AGTCTTTTAT TTCGGCCGCC 
TTGCTGTCTG CGGTGACCAA TCACAAGCCA ACAGCCTTAA CCCTGGGCAT TAAGCCGGTG 
GCGTCGGGCT GCCGGGTCAC AGAATTGGGG CTTAGAAACC CGGATGCCGA ACTGCTGATG 
GACCACAGCA GTGACAAGCT TGATTATCAG AGCGTCAACC CCATCGCGTT CGAGCCTGCA 
ATTGCTCCAC ATATTGCCGC CGCGAAGGCG GGGGTGGATA TAAGCCCGGA AGCCATTATG 
GCCAAGCTCG ATTTGGTCCG CATGAACTCG GCCGATTTTT GCTTGGTTGA AGGCGCTGGT 
GGCTGGCGTC TGCCGCTGGG CAATGGACGG TTTATGCCGG AAATGGTGCA GACACTTGAG 
TTGCCGGTCG TGCTGGTGGT GGGGATGAAG CTGGGCTGCC TGAACCATGC CATGCTGACT 
CAAGAAGCCA TTAAAGCTGA CGGACTGCGT ATTGCCGGCT GGGTTGCCAA TCGAATTGAC 
CCTGAAATGG CCTGCTATGA AGAAAATCTC GCGACGCTCA TATCTGTAAT GGACGCGCCG 
TTTCTGGGGG CTGTGCCCTA TATGGAGTCG GCTAAACCTG TCGATGCGGC CGCCTTTATT 
ACGCCGGGTC CCTTGTTGTC AGAACAACGC TGA 

 

Protein sequence

MMYFVTGTDT DCGKSFISAA LLSAVTNHKP TALTLGIKPV ASGCRVTELG LRNPDAELLM 
DHSSDKLDYQ SVNPIAFEPA IAPHIAAAKA GVDISPEAIM AKLDLVRMNS ADFCLVEGAG 
GWRLPLGNGR FMPEMVQTLE LPVVLVVGMK LGCLNHAMLT QEAIKADGLR IAGWVANRID 
PEMACYEENL ATLISVMDAP FLGAVPYMES AKPVDAAAFI TPGPLLSEQR