| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1440 |
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| Symbol | |
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| ID | 4603692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1750700 |
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| End bp | 1751446 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780790 |
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| Product | biotin synthesis protein BioC |
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| Protein accession | YP_927317 |
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| Protein GI | 119774577 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00159982 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC AATACGATGT GGCAGAGCAC TTTTCCCGCG CTCATCAGTA CGATTGCCAC
AACCTGCTGC AGCGATTAAC CGCAAATAAA CTGTTGACCA AGGCAGCGCT TGGGGGCCAT
TTACTGGATA TTGGCGCAGG CCCGGGGACC GATTTTTCGC TGTTCCCAGT CATTCGGGTG
ACTACGGTGG ATATTGCGTT CGCCATGTGT CAAAGGCTTA AAAGTCTTCA TCACTCCTAT
GAGGCTGTGT GCGCCGATGC TGCCGCCTTG CCTTTTTCCA ATGCGTGCTT CGATAGTCTC
TATTCCAATC TTGCGCTGCA ATGGTGCCCC GACTTTACCG TGGCGGTTGC TGAGGCGTCT
CGGGTGCTTA AACCCGGTGG TCGTGGCCAC TTTGCCATGG TGTGCGACGG CGCATTGCCA
GAGCTTGAAG CAATGGGTTT TTGTGTGAAT CATTTTGCGC CGGCATCCAT GATGGCAGCG
GCCTTCAGCG ACCAGGACTG GTGCGAATTA TCCATCGATG TGGTGACAGA AACCCTCTAT
TTTGATGATT TGCGGACACT GCTTTATTCC ATCAAAGGGG TTGGTGCCAG TGCCCGCCAC
GGTGCCGGGC AGGGCAAGGC ATTGCGTGGC CGAACCGACT GGCTGGCGAG GATGGATGAC
GCCGAACGCC TGAGAACACC TCAGGGCTTG CCACTGAGCT ATCAGATTTT GTATGTCAGT
GCGGTAAAGC GAGGAGCAAA CCTATGA
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| Protein sequence | MTTQYDVAEH FSRAHQYDCH NLLQRLTANK LLTKAALGGH LLDIGAGPGT DFSLFPVIRV
TTVDIAFAMC QRLKSLHHSY EAVCADAAAL PFSNACFDSL YSNLALQWCP DFTVAVAEAS
RVLKPGGRGH FAMVCDGALP ELEAMGFCVN HFAPASMMAA AFSDQDWCEL SIDVVTETLY
FDDLRTLLYS IKGVGASARH GAGQGKALRG RTDWLARMDD AERLRTPQGL PLSYQILYVS
AVKRGANL
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