Gene Sama_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1398 
Symbol 
ID4603650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1694638 
End bp1695435 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content53% 
IMG OID639780748 
Producthypothetical protein 
Protein accessionYP_927275 
Protein GI119774535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0466903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0522494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCG GGCTCGATGA GCAGGGCCTG GCCAGTTATC GTCTGCCCAT AGGTGACAGC 
GAAATCGCAC TGAATCCATT GATTGGAAAG CCAGTGAAGC TCATCTTTTC GGGCAATATC
TATTGCTGTA ATTGCGGCAA AAAGACCAAG AAAAGCTACT CCGAAGGCCA CTGTTATGTG
TGCATGCAAA AGCTCGCCAG CTGCGACATG TGCATCTTAA AACCCGAGAC CTGTCATTAC
GACCAGGGCA CCTGCCGCGA GCCTGAGTGG GGCGACAGCC ACTGCTTTGT GCCCCACTTT
GTGTACCTGT CGAACACATC CGGGCTCAAG GTGGGTATTA CCCGTCACAC CCAGATTCCT
ACCCGCTGGA TAGATCAGGG TGCGACCCAG GGCCTGCCTA TTCTGAAAGT GGCCTCCCGC
AAAATATCGG GACTGATTGA AGTGGAAATT GCCAAGCTGG TGGCGGATAA AACCCACTGG
CAGGCCATGC TCAAGGGCAA CAATGCCAAC ATGGATCTGG CCGCAGAAGC CGTCCGTTTA
CTGGCTGAAG TAGCACCGGT GATTGCAGAG GTTCGCCGCC AATATGGTGA GGATGCGGTG
CAGGAACTGG TCAGCCAACC ACAGCCCATT GTGTTTCCGG TGTCAGAGTT CCCCACCAAG
GTGAAGTCAT TCAATCTGGA TAAGGAGCCG CTTATCGATG CGGTGCTGAC CGGCATCAAG
GGCCAATACC TGATTTTTGA TACCGGTGTT ATCAATATTC GCAAATACAC GGGCTACGAA
ATCAGTTTTG AGTGCTGA
 
Protein sequence
MRTGLDEQGL ASYRLPIGDS EIALNPLIGK PVKLIFSGNI YCCNCGKKTK KSYSEGHCYV 
CMQKLASCDM CILKPETCHY DQGTCREPEW GDSHCFVPHF VYLSNTSGLK VGITRHTQIP
TRWIDQGATQ GLPILKVASR KISGLIEVEI AKLVADKTHW QAMLKGNNAN MDLAAEAVRL
LAEVAPVIAE VRRQYGEDAV QELVSQPQPI VFPVSEFPTK VKSFNLDKEP LIDAVLTGIK
GQYLIFDTGV INIRKYTGYE ISFEC