Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1398 |
Symbol | |
ID | 4603650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1694638 |
End bp | 1695435 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639780748 |
Product | hypothetical protein |
Protein accession | YP_927275 |
Protein GI | 119774535 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0466903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0522494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCG GGCTCGATGA GCAGGGCCTG GCCAGTTATC GTCTGCCCAT AGGTGACAGC GAAATCGCAC TGAATCCATT GATTGGAAAG CCAGTGAAGC TCATCTTTTC GGGCAATATC TATTGCTGTA ATTGCGGCAA AAAGACCAAG AAAAGCTACT CCGAAGGCCA CTGTTATGTG TGCATGCAAA AGCTCGCCAG CTGCGACATG TGCATCTTAA AACCCGAGAC CTGTCATTAC GACCAGGGCA CCTGCCGCGA GCCTGAGTGG GGCGACAGCC ACTGCTTTGT GCCCCACTTT GTGTACCTGT CGAACACATC CGGGCTCAAG GTGGGTATTA CCCGTCACAC CCAGATTCCT ACCCGCTGGA TAGATCAGGG TGCGACCCAG GGCCTGCCTA TTCTGAAAGT GGCCTCCCGC AAAATATCGG GACTGATTGA AGTGGAAATT GCCAAGCTGG TGGCGGATAA AACCCACTGG CAGGCCATGC TCAAGGGCAA CAATGCCAAC ATGGATCTGG CCGCAGAAGC CGTCCGTTTA CTGGCTGAAG TAGCACCGGT GATTGCAGAG GTTCGCCGCC AATATGGTGA GGATGCGGTG CAGGAACTGG TCAGCCAACC ACAGCCCATT GTGTTTCCGG TGTCAGAGTT CCCCACCAAG GTGAAGTCAT TCAATCTGGA TAAGGAGCCG CTTATCGATG CGGTGCTGAC CGGCATCAAG GGCCAATACC TGATTTTTGA TACCGGTGTT ATCAATATTC GCAAATACAC GGGCTACGAA ATCAGTTTTG AGTGCTGA
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Protein sequence | MRTGLDEQGL ASYRLPIGDS EIALNPLIGK PVKLIFSGNI YCCNCGKKTK KSYSEGHCYV CMQKLASCDM CILKPETCHY DQGTCREPEW GDSHCFVPHF VYLSNTSGLK VGITRHTQIP TRWIDQGATQ GLPILKVASR KISGLIEVEI AKLVADKTHW QAMLKGNNAN MDLAAEAVRL LAEVAPVIAE VRRQYGEDAV QELVSQPQPI VFPVSEFPTK VKSFNLDKEP LIDAVLTGIK GQYLIFDTGV INIRKYTGYE ISFEC
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