| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1374 |
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| Symbol | |
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| ID | 4603626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1664497 |
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| End bp | 1665447 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780724 |
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| Product | homoserine O-succinyltransferase |
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| Protein accession | YP_927251 |
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| Protein GI | 119774511 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1897] Homoserine trans-succinylase |
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| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.968831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0257357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTAA AAATCCCCGA CAATCTGCCC GCGGCAGAGA TACTGTCGGC CGAAAATATC
TTTGTGATGT CAGAAACCCG GGCGGCCCAT CAGGACATAC GTCCGATGAA GGTGCTTATC
CTCAATCTGA TGCCCAACAA GATAGAAACA GAAACCCAAC TGCTGAGGCT CCTTGGCAAT
ACACCCTTGC AGGTGGATGT GGACTTGCTG CGCATCCATG ACAAGGAGTC CCGCCACACC
TCGCTTGACC ACATGAATAC CTTTTACCGG GACTTTGAGG ATGTACGGCA TAAAAATTAT
GACGGCCTGA TCATCACGGG AGCGCCGCTG GGGCAGCTCG ATTTTGAAGA GGTGACCTAT
TGGGACCACA TCCGCGAAAT CATCGACTGG TCCCAAAGCC ATGTCACCTC GGTATTGTTT
TTGTGCTGGG CTGCCCATGC AGGGCTATAT CATCTCTATG GTCTCAAGCG TGAATTGCTG
AAAACCAAAC GCTCCGGCGT ATTTGTGCAC AGTCGCAGCT GCGACCACCA TCCGCTGCTG
CGTGGTTTCG ATGAGGAGTT TTTCGCCCCT CATTCACGTT ATGCCGAAAT TCCGGTGGCG
CAAATTCATG CTCACCCGGC ACTGCAGGTA CTGGCAGAGT CTGATGAGGC TGGGGCCTAT
CTGGTGCTGA GCCGAAACAG CCGTAACCTG TTTGTGATTG GTCACCCCGA ATACCAAAAA
TCCACCCTGA GCGATGAATA TCACCGGGAT TTGGCTGCGG GTATTAACCC CGAAATCCCC
CAAAATTACT TTCGAAATGA CGATCCGGCC CAGCCGCCGG TGGCGCGCTG GCACAGCCAT
GGCAGCCTCC TGGTGAGTAA CTGGCTTAAT TATTATGTGT ACCAGTTGAC CCCTTACGAT
TTGTCCGACA TGAGTGCCAT CACCCCCTGG GAGGCCAGCT CAAAATCTTG A
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| Protein sequence | MPVKIPDNLP AAEILSAENI FVMSETRAAH QDIRPMKVLI LNLMPNKIET ETQLLRLLGN
TPLQVDVDLL RIHDKESRHT SLDHMNTFYR DFEDVRHKNY DGLIITGAPL GQLDFEEVTY
WDHIREIIDW SQSHVTSVLF LCWAAHAGLY HLYGLKRELL KTKRSGVFVH SRSCDHHPLL
RGFDEEFFAP HSRYAEIPVA QIHAHPALQV LAESDEAGAY LVLSRNSRNL FVIGHPEYQK
STLSDEYHRD LAAGINPEIP QNYFRNDDPA QPPVARWHSH GSLLVSNWLN YYVYQLTPYD
LSDMSAITPW EASSKS
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