| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1371 |
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| Symbol | |
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| ID | 4603623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1662435 |
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| End bp | 1663076 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780721 |
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| Product | outer membrane protein W |
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| Protein accession | YP_927248 |
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| Protein GI | 119774508 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0573693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT CCTATCTGTC CGGTCTGATC GCTGCCTCCC TGCTGTCTGT TGTTTCTGCC
TCTGCTTTTG CGCACCAGGC TGGCGATATT ATCGTGCGTG CCGGTGCTGT TGTTGTTGCA
CCCAATGAGT CCAGCCCAGT CGTGGCTGAT GTGGCCGAAT TTGGTGTGAG CAACAACACT
CAGCTGGGTC TGAACTTTGG CTACATGCTG ACCGACAACT GGGCCATCGA ACTCCTGGCG
GCTACACCAT TCACCCATGA TGTGTCTCTT GGCGTGTTGG GCAAGATTGC CGAAACCAAG
CACCTGCCTC CGACGCTGGT TGCCCAGTAC TACTTTGGCA ACGCCAATTC CGCCTTCCGC
CCTTACGTGG GTGTGGGTGT GAACTACACC AACTTCTTTG ACACCGAATT CACCAACGAT
TTGGACGGTG CCCTGACCGA TTTGAGCCTG TCCACTTCAG TGGGTTGGGC CGCCCAGGTA
GGTTTTGACT ACAGTTTCAA CAAAAACTGG ATGCTGAACG CCTCTGTGTG GTACGCCGAC
ATCAGCACAG ACGTGAAATT CAACCTGGGT GATACCCCTG TTGTGGTTGA AACTGATATC
GACCCATGGG TTTACATGGT GAGTGTGGGT TATAAATTCT AA
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| Protein sequence | MKKSYLSGLI AASLLSVVSA SAFAHQAGDI IVRAGAVVVA PNESSPVVAD VAEFGVSNNT
QLGLNFGYML TDNWAIELLA ATPFTHDVSL GVLGKIAETK HLPPTLVAQY YFGNANSAFR
PYVGVGVNYT NFFDTEFTND LDGALTDLSL STSVGWAAQV GFDYSFNKNW MLNASVWYAD
ISTDVKFNLG DTPVVVETDI DPWVYMVSVG YKF
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