Gene Sama_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1323 
Symbol 
ID4603575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1611884 
End bp1612657 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content51% 
IMG OID639780673 
Producthypothetical protein 
Protein accessionYP_927200 
Protein GI119774460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.104999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTAA TGATCCTGCT CGCCTGTGGG GCCTTGTTGC TGCTCATTAT TGGAGTCAAC 
GTCGTTCAGC AGCAAAAGGA ACGTGCAGAG GCCGAGCGGC GTACAGAAGT TGCACGACAA
CGGGCGATTA TCGATGAGAC CGAAGGCGTA CTTTCCAACA CAGGTATGTT TCCCTGCAGC
ACCCATGTCG TCATGGTGCT TTATCGACGC ATCCAGGAAG CCCTGGCGGT GGCAGTCGAT
CTGAGCACGG GGCAACCCAA GTCCGATTAC CAACGTCGAT TAATTGATGT TCAAAGCCAA
ATCGAAGGCA TGAAAGGCGC CGTGAATGTA CCACCTGTTG AAAGCTTTCG CTTACCGGAT
AACGACAAGC AAATTCTGGT GATTGTGCAA ACCCTCAAAA AACTTAAAGC CATACTGAGA
GCCGAGCACA ATAAAGGCAA AGTAGACCCC ATGATTTTTG CCGATGAAGA GGCCCGGGTA
GACAGTCTGC AATTGCGTAT CAACGTCGAG TCCATGATTT CGCGCGCAAG GGCGGCCTGT
TACATGAAAC AGTATGGCTC TGCCAAGCAA ATGGTGACCA AGGCGCTATC AACCCTGCAC
GCGATTAAGG CACAGACCCC GAACGATCCT TTTATTGGTC GAAAAGTGGA TGAAGCCAAA
CAGTTGCTTG ATGAAATCAT GGGCGCCCAG AAGCTGTCCC AGCCAAGCGC GCCCAGCTCC
CGCAAGGAAG GTGACGATTT GGATATGCTG TTCCAACCCA AAAAGAAATG GTAA
 
Protein sequence
MLLMILLACG ALLLLIIGVN VVQQQKERAE AERRTEVARQ RAIIDETEGV LSNTGMFPCS 
THVVMVLYRR IQEALAVAVD LSTGQPKSDY QRRLIDVQSQ IEGMKGAVNV PPVESFRLPD
NDKQILVIVQ TLKKLKAILR AEHNKGKVDP MIFADEEARV DSLQLRINVE SMISRARAAC
YMKQYGSAKQ MVTKALSTLH AIKAQTPNDP FIGRKVDEAK QLLDEIMGAQ KLSQPSAPSS
RKEGDDLDML FQPKKKW