Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1323 |
Symbol | |
ID | 4603575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1611884 |
End bp | 1612657 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639780673 |
Product | hypothetical protein |
Protein accession | YP_927200 |
Protein GI | 119774460 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.104999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTATTAA TGATCCTGCT CGCCTGTGGG GCCTTGTTGC TGCTCATTAT TGGAGTCAAC GTCGTTCAGC AGCAAAAGGA ACGTGCAGAG GCCGAGCGGC GTACAGAAGT TGCACGACAA CGGGCGATTA TCGATGAGAC CGAAGGCGTA CTTTCCAACA CAGGTATGTT TCCCTGCAGC ACCCATGTCG TCATGGTGCT TTATCGACGC ATCCAGGAAG CCCTGGCGGT GGCAGTCGAT CTGAGCACGG GGCAACCCAA GTCCGATTAC CAACGTCGAT TAATTGATGT TCAAAGCCAA ATCGAAGGCA TGAAAGGCGC CGTGAATGTA CCACCTGTTG AAAGCTTTCG CTTACCGGAT AACGACAAGC AAATTCTGGT GATTGTGCAA ACCCTCAAAA AACTTAAAGC CATACTGAGA GCCGAGCACA ATAAAGGCAA AGTAGACCCC ATGATTTTTG CCGATGAAGA GGCCCGGGTA GACAGTCTGC AATTGCGTAT CAACGTCGAG TCCATGATTT CGCGCGCAAG GGCGGCCTGT TACATGAAAC AGTATGGCTC TGCCAAGCAA ATGGTGACCA AGGCGCTATC AACCCTGCAC GCGATTAAGG CACAGACCCC GAACGATCCT TTTATTGGTC GAAAAGTGGA TGAAGCCAAA CAGTTGCTTG ATGAAATCAT GGGCGCCCAG AAGCTGTCCC AGCCAAGCGC GCCCAGCTCC CGCAAGGAAG GTGACGATTT GGATATGCTG TTCCAACCCA AAAAGAAATG GTAA
|
Protein sequence | MLLMILLACG ALLLLIIGVN VVQQQKERAE AERRTEVARQ RAIIDETEGV LSNTGMFPCS THVVMVLYRR IQEALAVAVD LSTGQPKSDY QRRLIDVQSQ IEGMKGAVNV PPVESFRLPD NDKQILVIVQ TLKKLKAILR AEHNKGKVDP MIFADEEARV DSLQLRINVE SMISRARAAC YMKQYGSAKQ MVTKALSTLH AIKAQTPNDP FIGRKVDEAK QLLDEIMGAQ KLSQPSAPSS RKEGDDLDML FQPKKKW
|
| |