| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1319 |
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| Symbol | |
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| ID | 4603571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1603255 |
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| End bp | 1604568 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780669 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_927196 |
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| Protein GI | 119774456 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0460332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.366599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTG CACAATCCAG TAAAATTGGC CTGACAGGCA AGATCTTAAT CGGCATGGGC
GCCGGTATTT TGATAGGTTT GCTCCTTCGT AACTTTTTCG GCGGCAGTGA ATGGGTTCAG
GACTACATCA CCGAGGGTTT TTTCCATGTG ATAGGCACTA TATTTATCAA CAGTCTCAAG
ATGTTGGTTG TGCCTCTTGT CTTTATTTCA CTGGTCTGTG GAACCTGTTC TCTGAGTGAA
CCTTCCAAGT TAGGCCGACT GGGCGGTAAA ACCCTCGCGT TTTATCTGTT TACCACCGCT
ATCGCACTGG TCGTGGCAAT CTCTGCTGCG GTACTTGTCC AGCCCGGCAA TGCCTCTCTG
GCATCTGAAA GCATGCAGTA TTCGGCCAAG GAAGCCCCCA GTCTGGCGGA TGTGCTGATC
AACATAGTGC CATCCAACCC AATGAAGGCG CTGAGCGAAG GAAATATGCT GCAAATAATT
ATTTTTGCAG TAATTTTCGG TTTTGCCATA TCACACATTG GTGAGCGCGG ACGCCGTGTG
GCGGCCCTGT TTGATGACCT CAACGAAGTC ATCATGCGCG TGGTAACCCT CATTATGCAG
CTGGCTCCCT ACGGTGTGTT TGCCCTGATG GGGAAACTCG CACTGACCTT GGGTATGGAA
ACCCTTGAGA GCGTGATTAA GTACTTTATG CTGGTGTTGG TGGTGCTGCT GTTCCACGGA
TTTGTGGTGT ATCCAACCCT GCTTAAATTG TTCTCCGGCC TGAGTCCACT GATGTTCATC
CGTAAGATGC GTGATGTGCA GCTGTTTGCC TTTAGTACGG CCAGCTCTAA CGCAACCCTG
CCTGTCACCA TGGAAGCATC TGAGCACCGT CTGGGCGCCG ATAACAAAGT TGCCTCTTTC
ACCCTGCCAC TGGGCGCCAC CATCAACATG GATGGCACTG CTATTATGCA GGGCGTAGCG
ACTGTGTTTA TTGCTCAGGT ATTTGGTATC GACCTGACCA TCACCGACTA TGCCATGGTC
GTGATGACAG CCACACTGGC TTCCATCGGT ACTGCGGGCG TGCCTGGCGT TGGCCTGGTG
ATGCTGGCCA TGGTGCTCAA TCAGGTTGGC TTGCCGGTAG AAGGCATTGC GCTCATTTTG
GGTGTGGATC GTATGCTCGA TATGGTTCGC ACTGCGGTAA ACGTCACGGG TGATACAGTC
GCCACTGTGG TGATTGCCAA GTCTGAAGGC GCCCTCAACG AAGCCGTCTT TAATGACCCC
AAGGCAGGTA AAACCGCAGG CAGTTTTGAT GCTGAGGTTC ACCGCGGCGA ATAA
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| Protein sequence | MAAAQSSKIG LTGKILIGMG AGILIGLLLR NFFGGSEWVQ DYITEGFFHV IGTIFINSLK
MLVVPLVFIS LVCGTCSLSE PSKLGRLGGK TLAFYLFTTA IALVVAISAA VLVQPGNASL
ASESMQYSAK EAPSLADVLI NIVPSNPMKA LSEGNMLQII IFAVIFGFAI SHIGERGRRV
AALFDDLNEV IMRVVTLIMQ LAPYGVFALM GKLALTLGME TLESVIKYFM LVLVVLLFHG
FVVYPTLLKL FSGLSPLMFI RKMRDVQLFA FSTASSNATL PVTMEASEHR LGADNKVASF
TLPLGATINM DGTAIMQGVA TVFIAQVFGI DLTITDYAMV VMTATLASIG TAGVPGVGLV
MLAMVLNQVG LPVEGIALIL GVDRMLDMVR TAVNVTGDTV ATVVIAKSEG ALNEAVFNDP
KAGKTAGSFD AEVHRGE
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