Gene Sama_1315 details

Gene Information

• Locus tag: Sama_1315
• Symbol: adk
• ID: 4603567
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella amazonensis SB2B
• Kingdom: Bacteria
• Replicon accession: NC_008700
• Strand: +
• Start bp: 1599152
• End bp: 1599796
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639780665
• Product: adenylate kinase
• Protein accession: YP_927192
• Protein GI: 119774452
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0563] Adenylate kinase and related kinases
• TIGRFAM ID: [TIGR01351] adenylate kinases

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0119239
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 7
• Fosmid unclonability p-value: 0.109595
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCATTA TCCTATTGGG CGCCCCAGGT GCCGGTAAAG GTACCCAGGC TCAGTTCATC 
ATGGAACACT ACGGAATCCC CCAGATTTCT ACCGGCGACA TGCTGCGTGC AGCGGTCAAA 
GCCGGTACGC CCCTGGGTTT GGAAGCCAAG AAAGTGATGG ACGCAGGTCA GCTGGTTTCT 
GATGAACTGA TCATCGGTCT GGTGAAGGAG CGCATTGCTC AGGACGACTG CGCCAACGGT 
TTCCTGCTGG ACGGTTTCCC ACGCACCATT CCTCAGGCCG ATGCCATGGC TGCCAATGGC 
ATCAGCATCG ATCACGTGAT TGAAATTGAC GTGCCTGATG AAGAAATTGT GAACCGCATG 
AGCGGTCGCC GCGTACATCC AGGCTCAGGC CGTGTTTATC ACGTTGTGTT CAATCCACCC 
AAGGTGGAAG GCAAGGATGA CGTGACCGGT GAAGATCTGG TTATCCGTCC GGATGATGAA 
GAGAGCACAG TGCGTAAGCG TCTGGGTATT TACCACGAGC AAACCAAGCC ATTGGTTGAT 
TACTATGGCA AGGTTGCCGC CGAAGGTAAC ACCAAGTACA CCAAGTTTGA CGGTACCCAG 
AGCGTGGCCG AGGTCAGCAA GTTGATCCAG GCTGCCCTGA GCTGA 

 

Protein sequence

MRIILLGAPG AGKGTQAQFI MEHYGIPQIS TGDMLRAAVK AGTPLGLEAK KVMDAGQLVS 
DELIIGLVKE RIAQDDCANG FLLDGFPRTI PQADAMAANG ISIDHVIEID VPDEEIVNRM 
SGRRVHPGSG RVYHVVFNPP KVEGKDDVTG EDLVIRPDDE ESTVRKRLGI YHEQTKPLVD 
YYGKVAAEGN TKYTKFDGTQ SVAEVSKLIQ AALS