| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1312 |
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| Symbol | recR |
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| ID | 4603564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1595370 |
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| End bp | 1595969 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639780662 |
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| Product | recombination protein RecR |
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| Protein accession | YP_927189 |
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| Protein GI | 119774449 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000599572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.10008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTCA GTCCGCTGGT GGATGAGCTT ATTCAAAGTC TGCGTTGCCT GCCGGGAGTG
GGGCCTAAAT CGGCCCAGCG CATGGCCTTT GCGCTGCTGG AAAGCGATCG TAAAGCGGGC
ATCCGCCTGG CCGATACCCT GTCCCGGGCC ATGAGTGACG TGGGCCACTG CCAAAAGTGC
CGTACCTTCA CCGAACAGTC TCTGTGCCCG ATTTGCTCCA GCAGTAGGCG CGGAGAGGCC
GACACCCTGT GTGTGGTGGA AACCCCGGCG GATGTACTGG CCATCGAGTC CGGTGGCCAT
TTTCAGGGTC GCTATTTCGT GCTGCAGGGG CACTTATCTC CCCTTGACGG CATAGGGCCT
GAGGAGCTGG GGCTTTCTCT CCTTGAAGGC CAATTGGTCG GCGGTGGTAT CAGTGAGCTG
ATTTTGGCCA CCAACCCTAC CGTGGAAGGG GACGCCACGG CACACTACAT TGCCGATATT
GCCCGCAGAG CAGGGGTAGC GGTGAGCCGG ATTGCCCACG GTGTGCCCGT CGGCGGTGAG
CTTGAGTACG TCGACAGCAC CACCCTCGCG CTGAGCTTTA ACGGCCGCTT GCCGCTTTAA
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| Protein sequence | MKFSPLVDEL IQSLRCLPGV GPKSAQRMAF ALLESDRKAG IRLADTLSRA MSDVGHCQKC
RTFTEQSLCP ICSSSRRGEA DTLCVVETPA DVLAIESGGH FQGRYFVLQG HLSPLDGIGP
EELGLSLLEG QLVGGGISEL ILATNPTVEG DATAHYIADI ARRAGVAVSR IAHGVPVGGE
LEYVDSTTLA LSFNGRLPL
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