| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1293 |
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| Symbol | |
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| ID | 4603545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1579903 |
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| End bp | 1581117 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780643 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_927170 |
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| Protein GI | 119774430 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0405061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTC CTATCTATTT CGATTACGCC GCAACGACCC CGGTTGACCC GCGCGTTGCT
CAAAAAATGA TGCAGTACAT GACGATGGAC GGCATCTTTG GTAACCCGGC TTCCCGTTCC
CATCGTTACG GTTGGCAGGC GGAAGAAGCG GTAGATGTCG CCCGTTCGCA GGTGGCAGAT
CTGATTAATG CCGATCACCG CGAAATCGTG TTTACGTCCG GCGCCACCGA GTCAAACAAC
CTGGCTATTA AAGGCGTTGC ACACTTCTAT CAGAAGAAAG GCAAACACAT CATCACGAGC
AAAACCGAGC ACAAAGCCGT GCTGGATACG TGCCGCCAGC TGGAACGTGA AGGTTTTGAA
GTGACTTACC TCGAGCCTGG TGTGAACGGC ATCATTCCCA TGGAGCGCCT TGAGGCAGCC
ATGCGTGACG ACACCATTCT GCTGAGCCTG ATGCACGTGA ATAACGAAAT CGGCGTGGTA
CATGATATCG ATGCCATTGG TGAGCTGTGC CGCAGCAAGG GCATTATTTT CCACGTGGAT
GCTGCCCAGA GCGCCGGTAA ACTGCCGATT GACGTGCAAA TTACCAAGGT TGACCTGATG
TCGATTTCCG GTCACAAGAT GTATGGCCCT AAAGGTATTG GTGCGCTGTA TGTGCGCCGT
AAGCCACGCA TCCGTCTGGA AAGCCAGATG CACGGTGGCG GACACGAGCG CGGCATGCGC
AGCGGCACTC TGGCTACGCA TCAGATAGTA GGCCTCGGTG AAGCGGCTGC CATTGCCAAA
GCAGATATGG AAAGCGATAA CGCCCGTATC CACGCTCTGC GTGACCGCCT GTGGAACGGT
ATCAAAGATA TCGAAGAGAC CTATGTTAAC GGTGACTTCG AGCAGCGCTA CTGCGGTAAC
CTGAACGTCA GCTTTAACTT TGTTGAAGGT GAGTCCTTGA TGATGGCCCT GAAAGATTTA
GCCGTATCAT CGGGCTCTGC CTGTACGTCT GCCAGTCTTG AGCCAAGCTA TGTGCTGCGC
GCTTTGGGAC TGAGCGATGA AATGGCCCAC AGCTCAATCC GTTTTTCCAT CGGTCGCTTT
ACCACCGAGG AAGAAGTGGA TTACGCCATC GGCATTATCC AGGGCTCTAT CGGCAAGCTC
AGAGAAATGT CCCCACTTTG GGAGATGTTC AAAGATGGTG TCGATTTGAG CAAGGTTGAG
TGGGTACACC ACTGA
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| Protein sequence | MKLPIYFDYA ATTPVDPRVA QKMMQYMTMD GIFGNPASRS HRYGWQAEEA VDVARSQVAD
LINADHREIV FTSGATESNN LAIKGVAHFY QKKGKHIITS KTEHKAVLDT CRQLEREGFE
VTYLEPGVNG IIPMERLEAA MRDDTILLSL MHVNNEIGVV HDIDAIGELC RSKGIIFHVD
AAQSAGKLPI DVQITKVDLM SISGHKMYGP KGIGALYVRR KPRIRLESQM HGGGHERGMR
SGTLATHQIV GLGEAAAIAK ADMESDNARI HALRDRLWNG IKDIEETYVN GDFEQRYCGN
LNVSFNFVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLSDEMAH SSIRFSIGRF
TTEEEVDYAI GIIQGSIGKL REMSPLWEMF KDGVDLSKVE WVHH
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