Gene Sama_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1291 
Symbol 
ID4603543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1578350 
End bp1579171 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content57% 
IMG OID639780641 
ProductSerine O-acetyltransferase 
Protein accessionYP_927168 
Protein GI119774428 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.147219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0151136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTGA TATCCAGGCT GAAAGAAGAC ATTGCCTCCA TTTACCACCG GGATCCGGCG 
GCGCGCAGCG CCATTGAAAT CCTGCTGAAT TATCCCGGCA TGCATGCCAT TTGGCTGCAC
AGGATAAGTC ATAAACTGTG GAAGCGGGAT TGGCGTTTTT TGGCCCGATG TTTGTCGACT
TTCTCCCGCT GGCTGACCGG CGTGGAAATT CACCCGGGAG CCACCATTGG ACGTCGTTTC
TTTATCGACC ACGGTATGGG CATTGTGATT GGTGAAACCG CCGAGATTGG CGATGATTGC
ACCCTGTATC ACGGCGTGAC GCTGGGCGGC ACCAGCTGGA ATGCAGGTAA ACGTCACCCA
ACCCTTGAGA ATAACGTGGT GGTGGGTGCC GGTGCCAAAA TTCTCGGGCC TATCACCATG
AAAGAGGGCA GCCGTGTTGG CTCCAACTCA GTGGTGGTAA AAGATGTGCC AGAACACACC
ACGGTAGTAG GGATCCCCGG CCGTGCTGTG GCGCAGCCAT CGAGCCAGTC CAAAGAAACC
ACGGAACGTC GCAGCGCCAT GGCCAAAAAG TATGGCTTCG ACGCCTATGC GGTTTCGCCC
GACAATCCGG ACCCCGTCGC CAATGCCATC GGACAGATGC TCGACCACAT GCATCTGATG
GACTCTAAGG TGCAGGACCT TTGCCAGGAG CTGCAGCGCC TCGGCGGAAA CGTGTGCACC
GAGCGCCTGC CTGAGCTCGA TGTTGGCGAG TTCAGTGAGG CCGAAGCCGC CGCCGCAGAG
AAACGCCAGA ACGCGCTGGA TGAGTTTGAT CCCAGTATCT GA
 
Protein sequence
MGVISRLKED IASIYHRDPA ARSAIEILLN YPGMHAIWLH RISHKLWKRD WRFLARCLST 
FSRWLTGVEI HPGATIGRRF FIDHGMGIVI GETAEIGDDC TLYHGVTLGG TSWNAGKRHP
TLENNVVVGA GAKILGPITM KEGSRVGSNS VVVKDVPEHT TVVGIPGRAV AQPSSQSKET
TERRSAMAKK YGFDAYAVSP DNPDPVANAI GQMLDHMHLM DSKVQDLCQE LQRLGGNVCT
ERLPELDVGE FSEAEAAAAE KRQNALDEFD PSI