Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1288 |
Symbol | |
ID | 4603540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1575337 |
End bp | 1576506 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639780638 |
Product | hypothetical protein |
Protein accession | YP_927165 |
Protein GI | 119774425 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3213] Uncharacterized protein involved in response to NO |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0467877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.017488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAATA TCCATGATCC CCGCAAGACC GAATCCATCC CGCCACTGCT CAGACTGGGC TTTCGTCCGT TCTTTTTATT TGGCGCCGCC CTCAGCGTCC TGGGCGTTGT CCTTTGGGTA TTGGCACTAT CCGGCGCCAT TAACTTCCAA CCCCATGGAG GCGCTTACTG GTGGCACGGT CATGAGATGC TTTTTGGCTT TGTAACGGCC ATCATCGCCG GCTTTTTACT CACAGCTGTC CAGAATTGGA CCGGAGTGCC CGGGCTTGGC GGCAATAAGC TGCTGGCCCT GGTATTGCTG TGGCTTGCCC CCAGGCTCAC ACTTCCCATC ACCTCAGTTC CGTTCGAGCT GGTGATGGTA ATGGACCTCA CTTTTTTACC CGCTGTTGCC CTTGCATTGG GCCACAGTGT CACCAAGGTA AAACAATGGC GTAATCTGGT GTTTGTGCCC ATGCTGCTGT TGATGGCAAG CCTCAACGCC CTCTCCTACC TTGCTTTGAC CGACGGCAAC GCGATACAGG CCCAAAAGGC GCTGCACGGA GCCGCGTTGG TGGTAATCAT GATAGTGGCG CTCCTCGGTG GCCGGGTTAT CCCCTTTTTC ACTGAACGCG CCAGCGCCTA TCAGCGCAAG ACGAATCTTT GGTATCTCGA TGCCGGAACC TTTGTCTCGC TGTTGATGCT GATTGGGGCG CTGATTTTTG ATCTGACCGC ACTGCAACGC CCAATCGCCG CTGTAGCAGC CATCATTATT TTGCTTCGCT GGCATCGCTG GGGCTGGCGC CACACCCTGG GTGTCCCGCT GCTTTGGTCT TTGCATTTAA GCTACCTGTG CATTCCGGTC GGGCTCGGGA TCATTGCCAT GGGTCTGCCC TTTTCTGCAG GGTTTCATGC GCTGGCCGCC GGGGGCATGG GTGGCATGAT TCTGGCAATG ATGGCACGGG TTTCTCTGGG CCATACCGGC CGGATGCTTG AGCCCCCCAA AGCCATGGTG GCCGGTTTTG TGTTGGTACT GCTTGCCGTT GTACTCAGGG TGATGGCCGG GCTAATTCCT GCTGCATATC TGCCGCTGCT TATCGCCTCT GCAGTCACAT GGGGGCTGGC GTTTGGTATT TTTATCCTCA AATACGGCCC AATGCTGGCC TCCCCCAGAG CTGATGGCCG TCCGGGTTAG
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Protein sequence | MLNIHDPRKT ESIPPLLRLG FRPFFLFGAA LSVLGVVLWV LALSGAINFQ PHGGAYWWHG HEMLFGFVTA IIAGFLLTAV QNWTGVPGLG GNKLLALVLL WLAPRLTLPI TSVPFELVMV MDLTFLPAVA LALGHSVTKV KQWRNLVFVP MLLLMASLNA LSYLALTDGN AIQAQKALHG AALVVIMIVA LLGGRVIPFF TERASAYQRK TNLWYLDAGT FVSLLMLIGA LIFDLTALQR PIAAVAAIII LLRWHRWGWR HTLGVPLLWS LHLSYLCIPV GLGIIAMGLP FSAGFHALAA GGMGGMILAM MARVSLGHTG RMLEPPKAMV AGFVLVLLAV VLRVMAGLIP AAYLPLLIAS AVTWGLAFGI FILKYGPMLA SPRADGRPG
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