| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1275 |
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| Symbol | |
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| ID | 4603527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1563748 |
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| End bp | 1565865 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780625 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_927152 |
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| Protein GI | 119774412 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00198508 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGTGG TTATCAAGCG GGATGGTTGC CGCGCTGCCT TTGATGAAAC CCGGTTGCGG
GATGCTGTTA TTGCAGCCCA GGGCGCAGCC GGTGTCGAGG ATAAAGACTA TGCGGCCACG
GTGGCGTCGG TGGTGGCAGC CGAGGTGGCC CAGCGCGACG AAGTTGCTAT CCACGAGCTG
CAGGATGCAG TGGAAAACTG CCTGATGTCC GGTCCCTATA AAGAGGTTGC CCGTCACTAT
ATCGAATATC GCCACGACAG AGACGTATGC CGCGAAGCAA CCAGTCGACT GAATCTGGAA
ATCCGTTCGC TGGTGGAGCA AACCAATGCG GCGTTGCTGC ATGAAAACGC CAATAAAGAC
TCCAAGGTGA TCCCGACCCA ACGTGACTTG CTCGCCGGCA TTGTCGCCCG TCACTATGCC
AAGCGCCACA TTTTGCCCAA GGCGGTGGTG GCAGCCCATG AGGCGGGGGA GATACATTAT
CACGATCTGG ATTACTCACC CTTTTTCCCT ATGTTCAACT GCATGCTGAT TGACCTTGCT
GGCATGTTGA CCAAGGGCTT TAAAATGGGC AACGCCGAAA TCGAAACGCC CAAGTCTATT
TCCACCGCGA CTGCTGTGAC AGCGCAGATC ATCGCCCAGG TGGCCAGCCA CATCTATGGC
GGTACCACCA TCAATCGCAT CGATGAAGTG TTGTCACCCT ATGTGGCCAA GAGCTATGAC
AAACACTACC AAACGGCGCT GCACTGGGGC ATTACCGATG CGGTGGCCTA TGCCCGTGCC
CTGACAGAAA AAGAGTGTCA CGATGCTTTC CAGTCGCTGG AATACGAAGT GAACACCCTG
CATACGGCTA ACGGACAGAC CCCATTTGTC ACCTTTGGCT TTGGTCTTGG CACCAGTTGG
GAGTCGCGGC TGATTCAGCA GTCCATTCTT AAGGTGCGGA TGGCGGGACT GGGTAAAAAC
CGCAAAACAG CAGTATTCCC CAAACTGGTG TTTGCCATCC GCGATGGCAT CAATCACAAG
CAGGGTGACT GCAACTACGA TATCAAGCGT CTGGCACTCA AGTGCGCCAC CGAGCGCATG
TATCCGGACA TTCTCAACTA CGAGCAAGTG GTGCGTGTCA CCGGGTCATT CAAAACCCCC
ATGGGCTGTC GCAGCTTCCT TGGGGTGTAT GAAAAAGACG GTGAGTTGGA GCACGAAGGC
CGTAATAACC TGGGGGTGGT CAGTCTTAAC CTGCCACGTA TCGCCATTGA AGCCGGTGGC
GATGAAAGTC GCTTCTACAG CTTGCTGGAG GAGCGTTTGC AGGTGGCACG ACAGGCCCTC
GATAGCCGCA TTGAACGCCT GAAAGGGGTG AAGGCCCGGG TTGCGCCGAT TCTGTACATG
GAAGGAGCAT GCGGCGTTCG ACTGCGCCCG GACGATGATA TTGAGCCCAT ATTCAAAAAT
GGTCGTGCGT CCATCTCCCT TGGCTACATA GGCCTGCATG AAACCGTAAA CGCCCTTTAT
GGTACGCAGG AGCATGTGTA CGACTCCGAG GAGCTTCGGC AAAAAGCCGT TGCCATCGTG
GCGCGCCTCA AGCAGGCCAC CGAGCAATGG AAGCAGGAAA CCGGGTACGG TTTCAGCCTG
TACAGTACAC CCAGCGAAAG CCTGTGCAGC CGCTTTGCCA AGTTGGATAT CAAGGCCTTT
GGCCTGATAC AAGGGGTGAC TGACAAGGGC TACTACACCA ACAGTTTCCA CCTGGATGTG
GAAAAGAAAG TCTCGCCATT TGATAAAATC GATTTTGAGA TGCCATACCC AGAGCTCGCC
AGTGGTGGCT TTATTTGCTA CGGCGAATAT CCCAATATGC AGCACAATAT TGATGCACTG
GAGGACGTGT GGGACTACAG CTATACCCGG GTCCCTTACT ATGGCACCAA TACCCCCATC
GATGAGTGCT ACGACTGTGG CTTTACCGGC GAATTTGACT GCACCAGCAA GGGCTTTGTA
TGCCCGGTTT GCGGAAACCA TGAGCCCAGT CGTGTGTCAG TAACACGCAG GGTGTGTGGC
TATCTTGGCA GCCCTGATGC GCGTCCCTTT AATCATGGCA AGCAGGAAGA AGTCAAACGC
CGGGTCAAGC ATCTCTGA
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| Protein sequence | MPVVIKRDGC RAAFDETRLR DAVIAAQGAA GVEDKDYAAT VASVVAAEVA QRDEVAIHEL
QDAVENCLMS GPYKEVARHY IEYRHDRDVC REATSRLNLE IRSLVEQTNA ALLHENANKD
SKVIPTQRDL LAGIVARHYA KRHILPKAVV AAHEAGEIHY HDLDYSPFFP MFNCMLIDLA
GMLTKGFKMG NAEIETPKSI STATAVTAQI IAQVASHIYG GTTINRIDEV LSPYVAKSYD
KHYQTALHWG ITDAVAYARA LTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGTSW
ESRLIQQSIL KVRMAGLGKN RKTAVFPKLV FAIRDGINHK QGDCNYDIKR LALKCATERM
YPDILNYEQV VRVTGSFKTP MGCRSFLGVY EKDGELEHEG RNNLGVVSLN LPRIAIEAGG
DESRFYSLLE ERLQVARQAL DSRIERLKGV KARVAPILYM EGACGVRLRP DDDIEPIFKN
GRASISLGYI GLHETVNALY GTQEHVYDSE ELRQKAVAIV ARLKQATEQW KQETGYGFSL
YSTPSESLCS RFAKLDIKAF GLIQGVTDKG YYTNSFHLDV EKKVSPFDKI DFEMPYPELA
SGGFICYGEY PNMQHNIDAL EDVWDYSYTR VPYYGTNTPI DECYDCGFTG EFDCTSKGFV
CPVCGNHEPS RVSVTRRVCG YLGSPDARPF NHGKQEEVKR RVKHL
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