Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1255 |
Symbol | |
ID | 4603507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1543477 |
End bp | 1544832 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639780605 |
Product | MotA/TolQ/ExbB proton channel family protein |
Protein accession | YP_927132 |
Protein GI | 119774392 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.429171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000153929 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAGAAGT TAATTTCTAC CGCCGTTGTT GCGGCCAGTC TGTCACTCAC TGCCGGTATG GTTAGTGCTG CTGACGCGCC AAAGACTATT GATCAACTGC TTCAGCAAGT TAAAACTGAG CGTACCGCTG AAGGTAAAGT AAATGCCAAG CGCGAAGCTG AGTTCAAAGC TGAGCGTGGT GACAAAGCTT CTCTGCTGCA ACGTGAAAAA TCTGCTCTGG CTGCCGAAAA GCAGCGTGGC CAAGACCTGA ACCAGGCCTT CATCGACAAC GAGCGTAAAA TCGCTCAGCT CGAAGAAGAC CTGAAAACCG CTCAGGGTGA CCTGGGTGAA ATGTTTGGTG TGGTTAAAGG TGAAGCCGGT GATTTCGCTG GTAAGCTGGT AGGCTCTAAC GTATCTGCTC AGTACCCTAA GCGTGACGTG TTCATCGCTG ATCTGGGTTC TCGCAAGCAG CTGCCAAAAA TCGAAGAACT GGAAAAGTTC TGGCAAGAAC AGCTGTTCGA AATGGCTGAG TCTGGCAAAG TGGTTAAGTT TGAAGCTGCT GTAACCGACA TCGACGGTAA CGTAGTTAAC ACCACTGTTC ACCGTATCGG TTCTTTCAAC CTGACTGCCG ATGGCAAGTA TGTGGTATAC AACCCAGAAC TGGGTCTGAT CCAACAGCTG TCTGCTCAGC CAGAAGGTTA CCAGGTTGCG CCAATCGCTA AGTGGGAAGC CACTACCAGC GGTGCCGCCA AACTGTACAT CGACCCAGCT CGCGGTACTC TGCTGAACAT CTTCACCCAG AAAGCATCTT TCCAAGATCG TATCGAAGCC GGTGGCGTGA TTGGTTACAT CATCATCGGT CTGCTGGCCT TGGGTCTGCT GATTGGTCTT GAGCGTCTGC TGACTCTGTT CGTGATTGGT TCTAAAGTTA AATCTCAGGC CAAGAACGTA GCTAACCCAG GCAACAACGC ACTGGGCCGT ATCCTGAAAG TGTATCAGGA CAACAAAGAT GCCGACGTTG AAACTCTGGA ACTGAAACTG GATGAAGCCA TCCTGAAAGA AACTCCAGCT ATCGAGACTC GTATCTCTAT CATCAAAGTA CTGGCCGCTA TCGCTCCTAT GATGGGTCTG CTGGGTACCG TAACCGGTAT GATTGCAACC TTCCAGAGCA TCCAGCTGTT CGGTACTGGC GATCCAAAAC TGATGGCCGG CGGTATTTCT ATGGCACTGG TAACTACTGT TCAAGGTCTG GTTGCTGCTC TGCCTCTGAT GCTGGTTCAC GCTATCGTTG TGGCTCGCAG TAAGACCATC GTTCAAACTC TGGAAGAACA GAGTGCAGGT ATCATTGCTG AACACGCTGA GAAGAGGGCT AACTAA
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Protein sequence | MKKLISTAVV AASLSLTAGM VSAADAPKTI DQLLQQVKTE RTAEGKVNAK REAEFKAERG DKASLLQREK SALAAEKQRG QDLNQAFIDN ERKIAQLEED LKTAQGDLGE MFGVVKGEAG DFAGKLVGSN VSAQYPKRDV FIADLGSRKQ LPKIEELEKF WQEQLFEMAE SGKVVKFEAA VTDIDGNVVN TTVHRIGSFN LTADGKYVVY NPELGLIQQL SAQPEGYQVA PIAKWEATTS GAAKLYIDPA RGTLLNIFTQ KASFQDRIEA GGVIGYIIIG LLALGLLIGL ERLLTLFVIG SKVKSQAKNV ANPGNNALGR ILKVYQDNKD ADVETLELKL DEAILKETPA IETRISIIKV LAAIAPMMGL LGTVTGMIAT FQSIQLFGTG DPKLMAGGIS MALVTTVQGL VAALPLMLVH AIVVARSKTI VQTLEEQSAG IIAEHAEKRA N
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