| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1229 |
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| Symbol | |
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| ID | 4603481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1513527 |
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| End bp | 1514183 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780579 |
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| Product | putative uracil-DNA glycosylase |
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| Protein accession | YP_927106 |
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| Protein GI | 119774366 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0692] Uracil DNA glycosylase |
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| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACTGGC AACAACTTCT TGGAGACGAA AAACGCTCTG CGTACTTCCA GGACACCCTT
AAGTACATCA ATGAGCGCAT ACGCGCCGGA GTGACCGTCT ATCCGGCCAA GGCCGATATC
TTCAATGCGT TTCGATTTAC TCCTCTGGAG CAGGTTAAGG TGGTGATATT GGGGCAAGAT
CCTTACCACG GCCCCAATCA GGCACACGGT CTGTGCTTTT CAGTAAAATC CCCCTGTCCA
CCCCCTCCCT CTCTGCAGAA CATCTTTATC GAGCTCACCA ATTCAATCCC GGGCTTTATT
GCCCCTTCCC ATGGGGACTT AACTCCTTGG GCAACTCAAG GCGTGTTGCT ACTCAATACT
ATATTGACAG TGGAGCGCGG ACAGGCACAT TCCCACGCCC ACCTGGGCTG GGAGCGGTTT
ACCGATGCAG TAATACGTGG CATCAGTACC CATTGTCACG GGGTGATATT TTTGCTTTGG
GGCAGCCATG CCGGCAAAAA AGCGGGCTTG ATTGACGGCA GCAGACACAG AGTACTGCAA
GCGCCGCACC CGTCACCGTT CTCTGCACAC AAAGGCTTTT TTGGTTGCAA TCACTTTGCC
ATTGCCAATG ACATGCTGAG ACATCAGGGC AAATCTCCCA TAGAGTGGCA ACTCTGA
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| Protein sequence | MDWQQLLGDE KRSAYFQDTL KYINERIRAG VTVYPAKADI FNAFRFTPLE QVKVVILGQD
PYHGPNQAHG LCFSVKSPCP PPPSLQNIFI ELTNSIPGFI APSHGDLTPW ATQGVLLLNT
ILTVERGQAH SHAHLGWERF TDAVIRGIST HCHGVIFLLW GSHAGKKAGL IDGSRHRVLQ
APHPSPFSAH KGFFGCNHFA IANDMLRHQG KSPIEWQL
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