Gene Sama_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1222 
Symbol 
ID4603474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1503327 
End bp1504181 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content57% 
IMG OID639780569 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_927099 
Protein GI119774359 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000458246 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCC AAAATATCGA TGGCAAGGCC ATTGCCCGTG CCATTCGCAC TACCCTCAGC 
GACAAGGTAA AAGCCCGTAA AGAGGCCGGC CAGCGCATTC CGGGTCTTGC CGTAATCCTG
GTGGGGTTGG ATCCCGCCTC CCAGGTCTAT GTTGGTTCCA AGCGCAAGGC CTGCGAAGAG
GTCGGATTCT TATCCCAGTC CTTTGACCTG CCCGACACCA CCAGCGAGGA CGATCTGCTG
GCGCTGATTG ACCGCTGCAA TGAAGACCCG GCCATCGATG GCATTCTGGT GCAATTGCCA
CTGCCTGCGC ACATTGACTC TTCCAAGGTG ATTGAACGTA TTCGCCCCGA TAAAGATGTC
GATGGTTTCC ACCCTTATAA TGTGGGCAGA TTGGCACAGC GCATTCCTGT GCTGCGCTCC
TGCACCCCTA TGGGCATCAT GACCCTTATC CGCTCTACCG GCGTGGATAC CTATGGTCTG
GATGCCGTCG TGGTTGGTGC CTCCAATATC GTGGGCCGCC CCATGACACT GGAGTTGCTG
CTGGCAGGCT GCACCACCAC CACCTGCCAT CGCTTTACCA AAAACCTCGA AGATAAGGTG
CGTCAGGCTG ACTTGCTGGT TGTGGCCGTG GGTAAACCCC ACTTTATTCC CGGCGACTGG
ATTAAGCCCG GTGCCATTGT GATTGACGTG GGTATCAACC GTCTCGATGA CGGCCGCTTG
GTAGGGGATG TTGAATTCGA CGTGGCGGCA GAACGTGCAG CCTTTATCAC TCCAGTGCCT
GGTGGCGTGG GGCCAATGAC CATTGCGAGT CTGTTGGAAA ACACCCTCTA TGCCGCTGAG
AACTATCACG ACTGA
 
Protein sequence
MTAQNIDGKA IARAIRTTLS DKVKARKEAG QRIPGLAVIL VGLDPASQVY VGSKRKACEE 
VGFLSQSFDL PDTTSEDDLL ALIDRCNEDP AIDGILVQLP LPAHIDSSKV IERIRPDKDV
DGFHPYNVGR LAQRIPVLRS CTPMGIMTLI RSTGVDTYGL DAVVVGASNI VGRPMTLELL
LAGCTTTTCH RFTKNLEDKV RQADLLVVAV GKPHFIPGDW IKPGAIVIDV GINRLDDGRL
VGDVEFDVAA ERAAFITPVP GGVGPMTIAS LLENTLYAAE NYHD