| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1221 |
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| Symbol | cysS |
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| ID | 4603473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1501835 |
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| End bp | 1503214 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780568 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_927098 |
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| Protein GI | 119774358 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000543718 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGAAGA TATACAATAG TATCAGTCGT CAAAAAGAGG AGTTTAAACC CATACAGCCA
GGCAAAATTG GCATGTATGT TTGTGGTGTG ACGATCTATG ACCTGTGCCA CATCGGCCAT
GGTCGTACTT TTGTGTGTTT TGACATGATT GTGCGTTATC TGCGTTACCG CGGTTACGAG
GTAAATTACC AGCGCAATAT CACCGACGTG GATGACAAGA TCATCAAGCG CGCCAACGAA
AATGGCGAGA GCTGTGACAG CCTCACTGAG CGTTTAATTG GTGAAATGCA TGCCGATTTC
GACGCGCTAA ACATGGTGCG TCCAAGCTTC GAACCCCGCG CAACCCTTCA CATCGACGAA
ATCATCGACA TGGTGACCCG TTTGCTCGAC CGTGGTCATG CGTATGTCGC TGCCGATGGC
GACGTGCTGT TTGATGTGTC CTCGTATGCC GCATACGGCC GCCTGTCAGG GCAGGACCTC
GAGCAGCTGC AAGCCGGTGC TCGCGTTGAA GTGGATGAAA ACAAACGTAA TCCAATGGAT
TTCGTGCTGT GGAAGATGTC CAAACCCGGC GAGCCTACCT GGGATTCGCC GTGGGGTCCG
GGTCGTCCAG GTTGGCACAT CGAGTGCTCG GCCATGAACA GCAAACATCT GGGGCTTCAT
TTCGACATCC ATGGCGGTGG CAGTGATTTG CAGTTCCCGC ACCATGAAAA CGAAATTGCC
CAGTCCTGCT GCGCCCATGA CACACCATAT GTGAACACCT GGATGCACAC AGGTATGGTG
ATGGTTGACC GCGAGAAGAT GTCCAAGTCC CTTGGCAACT TCTTCACCAT CCGTGATGTG
CTTGCACATT ACGATGCCCA AACCGTGCGC TATTTCCTGC TTTCCGGCCA CTATCGCAGC
CAGCTGAATT ACAGCGAAGA CAATTTGAAA CAGGCTCGTG CTTCTCTCGA GCGTATGTAT
ACCGCACTCA AAGGTCTGGA TCTGACCGTC GAAGCCGCTG GTGCTGATGA GTTTGTCAGC
CGCTTTATGG CCGCAATGGA CGATGACTTC AACACCCCAG AAGCCTATTC AGTGCTCTTT
GACATGGTGC GTGAAATTAA CCGTCTGAAA ACCAGCGACA TGGCCGCAGC ATCCCAATTG
GGTGTGGCAC TCAAAGAGCT TGCCGAAGTA CTGGGCATTT TGTCTTCAAC ACCTGAGGCT
TTTCTCCAGG GCGAAGGTAA TGCCGACGAA GTGGCTGAAA TTGAAGCACT GATCGTTGAG
CGCAACCGTG CCCGCGCCGA GAAGGACTGG CCTGCTGCCG ACGTGGCCCG TGACCGCTTG
AACGCCCTCG GCGTAGTGCT TGAAGATGGC CCGGAAGGGA CTACCTGGCG AAAGAAGTAA
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| Protein sequence | MLKIYNSISR QKEEFKPIQP GKIGMYVCGV TIYDLCHIGH GRTFVCFDMI VRYLRYRGYE
VNYQRNITDV DDKIIKRANE NGESCDSLTE RLIGEMHADF DALNMVRPSF EPRATLHIDE
IIDMVTRLLD RGHAYVAADG DVLFDVSSYA AYGRLSGQDL EQLQAGARVE VDENKRNPMD
FVLWKMSKPG EPTWDSPWGP GRPGWHIECS AMNSKHLGLH FDIHGGGSDL QFPHHENEIA
QSCCAHDTPY VNTWMHTGMV MVDREKMSKS LGNFFTIRDV LAHYDAQTVR YFLLSGHYRS
QLNYSEDNLK QARASLERMY TALKGLDLTV EAAGADEFVS RFMAAMDDDF NTPEAYSVLF
DMVREINRLK TSDMAAASQL GVALKELAEV LGILSSTPEA FLQGEGNADE VAEIEALIVE
RNRARAEKDW PAADVARDRL NALGVVLEDG PEGTTWRKK
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