| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1206 |
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| Symbol | |
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| ID | 4603458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1478828 |
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| End bp | 1480909 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780553 |
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| Product | outer membrane protein precursor MtrB |
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| Protein accession | YP_927083 |
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| Protein GI | 119774343 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00712734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.823248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTC AACTCAATAT GATCACCCTG GCGCTGCTGG CGGCCTCAGC TCCGGCACTG
GCCGGTGGCT ACAGCCTGAA CAATGCCAAC ACCGACAAGG TGAAATTCGA TGCCTGGGCC
TGTAAGGGCT GTACGCTGGA AACAGGCACT CAGGGTAACA TCGGCATAGG TGTAGGTTAT
CAGGACACAG ATGATGTTCG CTCCGCCAAC AGCTTTGGCA GCGACGAGGA AGTGCCGTAC
AAAGTGGATG CCGACGTGCG CCACGTGACG GAATCAGGCT ATCGCACCGA GTTCAATGCC
GAGAATCTTG GCATGGATAA CGCCAATGCC AGCCTGAAAA CCGGTCGCCC CGGCAGTTAC
AACGTGAGTC TGGACTATCG CAGCATCAAG ACCTATGAGT CTGATACCCT GGTCAGCCCA
TTTGAAGGCA TTGGCTCGGG TACCCTAACC CTGCCCAGTG ACTGGGTATA CTCAGGCTCC
AGTGACGGTA TGAGCGGTCT GGCCTCGGCC AATCCCTTTG AAATATCACT CAAACGCGAG
AAGGCTGGCC TGGGCTTTGC CTATCAAAGC GAGTCCGCCT TTGCCACCTA TGTGCATTAT
CAGCGGGAAG AAAAGACGGG GCTGAAAACC GCCTCCGGCA GTTTCTTCAA CCAGTCCATC
ATGCTGCCAG AGCCTGTGGA TTACACCACA GATACAGTGG AAGCCGGTGT CAAGCTCAAG
GGCGATAATG GCTTCCTGGC ATTGGTGTAC AACGGCAGCC GTTTCTCAAA TGGCTACAGC
GAGCTGAGTT TTGACAACCC CTTCCATCCC ACCTTTGGTG CGGCCAGAAG TGGCGCTATG
GCGCTGGATC CTGATAATCA GGCCCACACG GTGTCGCTGC AGGGACTCTA CAACGATGGC
AAGAGTCAGC TTACCGGACG TCTGATGGCA GGTCAGATGA GCCAGGATGA GCCGCTGGTC
ACCACGGGTT ATGGTTATGC CCTGCCTGTG GAAGCTGTGG ATGCCAAAGT GGACATCATT
GGCATGACCC TGAAAGCGTC CAGCCGCGTC AACAAGGACC TGCGTCTGTC AGGCAGTTAC
GATTACAGTG ACCGTGACAA CAAGACTCAG GTCGAAGAGT GGACGCAGAT CAGCATCAAC
AATGTGTCCG GCAAGGTGGC GTACAACACC CCCTATGACC ACACCAGCCA CAGATTCAAG
GCCGGTGCCG ATTACCGTGT CAGCCGCGGT ATCAAGCTCG ATGGCGGTGT GGACTACAGG
GTAGATGAGC GCAACTACCA GGACAGAGAG ACCACTGAAG AAACCACCGG CTGGGCAAGA
CTGCGCCTGG GTAACTTCGA ACACTGGGAT TTCTCGCTCA AAGGCAGTTA CGGCACCCGC
GGCGGCAGTG AATACCAGGC AAGCGAATGG ACCTCGTCGG AGAACAATGC CCTGCTGCGT
AAGTACTATC TGGCAGATCG CAATCGCACC CAGGCTGAAA TGCGCGTGTC CCACACACCG
CTCGACACCC TGAGTCTCGA TTTCGGAGTG CGTTATGCCC TCGATGATTA CGATGCTACC
CAGATTGGTC TGACCGAATC CAAGGATTTG GGCTACGATG CCAGCCTTAG TTGGCAGCTC
ACTGAACGTC TGCTTTTGAG TGGTTTTTAC ACCCACCAAA CCATCGACTC GGCCCAGGCT
GGCAGCAGCA ACTTTGCCAC CGCCAACTGG TTCTCCGATA TCGAAGACAA GGTAGATGTC
TATGGTCTGG GTCTGGCCTA CAACCAATTG ATGGATGGCA GGCTGAAACT CGGCGCCGAT
TACAGCTTCT CGGATTCAGA GAGTACAACT CAGGTACGTC AGGGGATCAC CGGCGACTAC
GGCGATTATT TTGCCAAGGT GCACAATCTG AACCTGTACG CCCAGTTCCA GGCCAGTGAG
CGCATAGCCG TGCGCCTCGA CTATCGCATG GAAAACTACC GTGATAACGA TGAAGCCCGG
GATATTGCCG TGGATGGCAT CTGGAATCTG GTGAGTTTTG GCTCCATGAA CCATGATTAC
AACGCCCACC TGGTTATGCT TAGCATGAGC TATCGGCTCT AA
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| Protein sequence | MRFQLNMITL ALLAASAPAL AGGYSLNNAN TDKVKFDAWA CKGCTLETGT QGNIGIGVGY
QDTDDVRSAN SFGSDEEVPY KVDADVRHVT ESGYRTEFNA ENLGMDNANA SLKTGRPGSY
NVSLDYRSIK TYESDTLVSP FEGIGSGTLT LPSDWVYSGS SDGMSGLASA NPFEISLKRE
KAGLGFAYQS ESAFATYVHY QREEKTGLKT ASGSFFNQSI MLPEPVDYTT DTVEAGVKLK
GDNGFLALVY NGSRFSNGYS ELSFDNPFHP TFGAARSGAM ALDPDNQAHT VSLQGLYNDG
KSQLTGRLMA GQMSQDEPLV TTGYGYALPV EAVDAKVDII GMTLKASSRV NKDLRLSGSY
DYSDRDNKTQ VEEWTQISIN NVSGKVAYNT PYDHTSHRFK AGADYRVSRG IKLDGGVDYR
VDERNYQDRE TTEETTGWAR LRLGNFEHWD FSLKGSYGTR GGSEYQASEW TSSENNALLR
KYYLADRNRT QAEMRVSHTP LDTLSLDFGV RYALDDYDAT QIGLTESKDL GYDASLSWQL
TERLLLSGFY THQTIDSAQA GSSNFATANW FSDIEDKVDV YGLGLAYNQL MDGRLKLGAD
YSFSDSESTT QVRQGITGDY GDYFAKVHNL NLYAQFQASE RIAVRLDYRM ENYRDNDEAR
DIAVDGIWNL VSFGSMNHDY NAHLVMLSMS YRL
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