| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1196 |
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| Symbol | |
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| ID | 4603448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1466224 |
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| End bp | 1467417 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639780543 |
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| Product | phosphosugar isomerase |
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| Protein accession | YP_927073 |
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| Protein GI | 119774333 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2222] Predicted phosphosugar isomerases |
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| TIGRFAM ID | [TIGR02815] putative sugar isomerase, AgaS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.570521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTCA ACGACCTATC AAAGACCAAG ATCTGCCTGG AATTCGGTGA AGACGCATTG
CGTCAGCCAC CGAAGGGCAG TCAGTGGACG GCAGAGGAAA TTTGTCAGCA GCCCCGGCTG
TGGCGGGAAA TGGCGGAGCA GTTTGTGCAG GAGAAGAGCA GGTTGCAGGA CTTTGCCGCG
CCGCTTCTGG CCCTGCCTGA CTTGCGGGTT ATCCTCACAG GTGCCGGGAC GTCGGCGTAC
ATCGGCGAAG CGCTGGCGCC CTTTTTGGCG ACCCAGATGC CGCTGGTGGG GCAAACGGTG
GAGGCCATTG CCACCACGGA CCTGGTGTCA CATCCACACC TCTATCTGCA TCCGGCCAGG
CCAACTCTGG TAATTTCCTT TGGCCGCTCA GGCAGCAGTC CTGAGTCCAT GGCTGCCATC
GAACTGTGCG ACGCCCTCTT GCCCCGGTGT TACCACCTGC TGCTGACCTG TAATCCACAG
GGGAGCATGG CAAGGTACGG CGAGCAGCAG GCACAGCGCG CCTGCCTCTG GCTGATGCCG
GAAGGCAGCC ATGACAGAAG CTTTGCCATG ACCAGCAGCT TCAGCTGCAT GTACCTGGGC
GTGCTCTTGC TGTTTGCGGC CAATTACAGC GCCCTGGCAA GGGCGGTTAC CCTGGCTGAG
CGAATGCTCT GCGACCGGGT GGACGAGATT GCCAAACTTG CCGCTTTACC TCTCTCGCGG
GTGGTATTTT TGGGTGGTGG TACCTTGCAG GGCATCGCCC GAGAAGCCGC ACTCAAATTA
TTGGAACTCA GTGCCGGCGC CGTGATGGGG GTGCATGAGA GTCCGCTTGG CTTCCGTCAT
GGCCCCAAGT CACTTATCGA TAAGGACTCC CTGGTCGTGG TGCTTTGCTC ATCTGAACCT
TATGCCCGCG CCTACGACAT GGACATGGCT GCTGAGCTTG AACGGGATGG GGCGGCCAGT
GCCTTGGTGC GTCTTTGTGA AGAAAATGTT GGCGCAGATG CTCAGACTTT GCTCGAGGAT
GTCTGGCTTA CCTTCCCCTA TATCCTGTAT TGTCAACTTT TTGCGTATTT CAAGGCCCTC
AATCTTGGGA TCAGCGCCGA CAACCCTTGC CCCGGTGGCC AGGTGAATCG CGTCGTCCAG
GGGGTCAAAA TCTATCCCCT CAACCAATAT CGGTTGCCGG GAGTCGGGGT ATAA
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| Protein sequence | MQVNDLSKTK ICLEFGEDAL RQPPKGSQWT AEEICQQPRL WREMAEQFVQ EKSRLQDFAA
PLLALPDLRV ILTGAGTSAY IGEALAPFLA TQMPLVGQTV EAIATTDLVS HPHLYLHPAR
PTLVISFGRS GSSPESMAAI ELCDALLPRC YHLLLTCNPQ GSMARYGEQQ AQRACLWLMP
EGSHDRSFAM TSSFSCMYLG VLLLFAANYS ALARAVTLAE RMLCDRVDEI AKLAALPLSR
VVFLGGGTLQ GIAREAALKL LELSAGAVMG VHESPLGFRH GPKSLIDKDS LVVVLCSSEP
YARAYDMDMA AELERDGAAS ALVRLCEENV GADAQTLLED VWLTFPYILY CQLFAYFKAL
NLGISADNPC PGGQVNRVVQ GVKIYPLNQY RLPGVGV
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