| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1177 |
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| Symbol | |
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| ID | 4603429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1437930 |
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| End bp | 1439450 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780524 |
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| Product | proton-dependent oligopeptide transporter (POT) family protein |
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| Protein accession | YP_927054 |
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| Protein GI | 119774314 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.980946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAG GGAATACACA GGTCTCCAAG ACCCGGTCCT TTATGACGGT GTCGCTGATT
GAACTGTGGG AGCGTTTTGG CTTCTACGGT ATGCAGGCGC TGATTGTTTA CTTTATGGTT
CAGCGCCTTG GCTTTGCCGA TGAGCGCGCC AATTTGGTGT GGAGCGCCTG CGCCGCACTC
ATTTATGTGG CGCCCGCCAT CGGTGGCTGG GTCGGAGACA AGGTGCTCGG CACCAAGCGC
ACCATGCTGC TGGGCGCAGG GATATTGACG CTGGGTTACG CCCTCATGGC CGTGCCGACC
GATAATACCT GGTTTTTGTT CTCAGCCCTC GGGGTTATCG TGGTGGGTAA CGGGCTGTTC
AAACCCAATG CCGGTAATCT GGTACGCAAA ATTTATGATG GCGACGACTC CAAAATCGAC
AGTGCCTTCA CCATCTATTA CATGGCGGTC AACGTAGGTT CGACCTTCTC CATGTTGCTC
ACCCCCTGGA TTAAGGACTA CGTCAACGCC AACTATGGTG ACGGCTTTGG TTGGCACGCC
GCCTTTGCTG TGTGTTTCGT GGGCCTGATT GTCGGTATCG GCAACTACAT GATGATGCGC
CATACCCTGG ATAATTATGG CTCTGAGCCA GACCTGCTGC CGGTGGACAA GCGCAAGCTT
GCGGCTGTAT TGGGGGCATC GCTGCTGGCG GTGGTGGTTT CTGCGGTCAT ACTCGAATTT
GAAGATATCG CCCGGGTATT TGTGTACGGC GCAGGCCTGG TGGTGCTGGG GATCTTTATC
CACCTTATCC GCACCAGTGA AGAGAGCGAG CGGGCAGGGC TGTTAGCCGC GCTGGTACTG
ACGCTGCAAT CTGTGTTCTT TTTTATCTTT TACCAGCAGA TGTCCACCTC GCTGGCGCTC
TTTGCACTGC GAAACGTAGA CTGGGACTTT GTGGTGATGG GGCAGCATTT GTGGACCTGG
TCTCCAGCGC AGTTTCAGGC GCTTAATCCC ATCTGGATCA TGGTGTTAAG CCCAATCCTT
GCCTGGGCCT ATGCCTGGGG AGGCAAGCAC AACAAGGATA TCTCCATTGC CGCCAAGTTT
GCCCTGGGGT TTGCCGTGGT GGCCGCAGGC TTCTTTATCT ACAGTGTGGC CGGAGAGTTT
GCCGTAAACG GCAAGACCTC AAGCTGGGTG ATGATTTGGG GCTATGGCGC CTATTCGCTG
GGCGAGCTCT TGGTGAGTGG ACTGGGCCTT GCCATGATTG CTCGCTATGT GCCCGAGCGC
ATGGGCGGCT TTATGATGGG TGCCTACTTT GTGGCAACTG GTATCAGCCA GTATCTGGGC
GGTGTGGTGG CCAACTTTGC CAGCGTGCCG CAAGGCATTA CCAATCCGCT GGAAACCCTG
ACCATCTATA CCAGCCTGTT TAATAAGCTG GGTTTTGCGG CCCTGGGGTG CACCCTGATT
GCACTGGCGG TATTGCCGCT GATGCGCCGT TTAACCGAGA CGCACCATAG CCACAACGGC
AGTGACCAGG TCGGTGCCTG A
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| Protein sequence | MTTGNTQVSK TRSFMTVSLI ELWERFGFYG MQALIVYFMV QRLGFADERA NLVWSACAAL
IYVAPAIGGW VGDKVLGTKR TMLLGAGILT LGYALMAVPT DNTWFLFSAL GVIVVGNGLF
KPNAGNLVRK IYDGDDSKID SAFTIYYMAV NVGSTFSMLL TPWIKDYVNA NYGDGFGWHA
AFAVCFVGLI VGIGNYMMMR HTLDNYGSEP DLLPVDKRKL AAVLGASLLA VVVSAVILEF
EDIARVFVYG AGLVVLGIFI HLIRTSEESE RAGLLAALVL TLQSVFFFIF YQQMSTSLAL
FALRNVDWDF VVMGQHLWTW SPAQFQALNP IWIMVLSPIL AWAYAWGGKH NKDISIAAKF
ALGFAVVAAG FFIYSVAGEF AVNGKTSSWV MIWGYGAYSL GELLVSGLGL AMIARYVPER
MGGFMMGAYF VATGISQYLG GVVANFASVP QGITNPLETL TIYTSLFNKL GFAALGCTLI
ALAVLPLMRR LTETHHSHNG SDQVGA
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