| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1153 |
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| Symbol | rnhB |
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| ID | 4603405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1403337 |
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| End bp | 1403957 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639780500 |
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| Product | ribonuclease HII |
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| Protein accession | YP_927030 |
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| Protein GI | 119774290 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0164] Ribonuclease HII |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.344887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.712948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGTGT ATAAAAATCT TAGCCCAGAG CAAACCGTGC TGCTGCAACA GGGACGGGTC
GCCGGCGTTG ATGAAGTGGG CCGTGGCCCG CTGGTGGGCG ATGTGGTGAC CGCTGCGGTT
ATTCTGGATC CAAACAAGCC CATTGCTGGC TTGAATGACT CAAAGAAGCT CACCGAGAAA
AAGCGCGACG CACTTTATCT TGAGATTATG GATAAGGCGC TGGCGGTGTC GGTGGGCCGT
GCCAGCCCAA CTGAAATCGA CGAGCTTAAT ATTCTCCACG CGACCATGCT CGCGATGCAG
CGAGCCGTTG CCGGACTGAC GATTGTTCCC GAGTCCGTCC TGGTGGATGG CAACCGAACG
CCGGATTTTG GTGTACCTGC CCATGCGGTA GTCAAAGGCG ATGGCCTGAT AGCCGCTATC
AGCGCCGCTT CTGTCATTGC CAAAGTCACC CGTGACCGTG AGATGGGAGA GCTGGATGCC
CGGTATCCCC AGTACGGCTT TGCCGGGCAC AAGGGATACC CAACCAAGGC ACACTTTGAG
GCGATAAGTG CCCATGGGGT GCTCGCGGAG CACAGGCGCA GTTTTCGTCC GGTGCGCGAG
TGGTTGGAGG CTAACAGCTG A
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| Protein sequence | MAVYKNLSPE QTVLLQQGRV AGVDEVGRGP LVGDVVTAAV ILDPNKPIAG LNDSKKLTEK
KRDALYLEIM DKALAVSVGR ASPTEIDELN ILHATMLAMQ RAVAGLTIVP ESVLVDGNRT
PDFGVPAHAV VKGDGLIAAI SAASVIAKVT RDREMGELDA RYPQYGFAGH KGYPTKAHFE
AISAHGVLAE HRRSFRPVRE WLEANS
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