| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1141 |
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| Symbol | pyrH |
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| ID | 4603393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1391076 |
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| End bp | 1391801 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780488 |
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| Product | uridylate kinase |
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| Protein accession | YP_927018 |
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| Protein GI | 119774278 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0528] Uridylate kinase |
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| TIGRFAM ID | [TIGR02075] uridylate kinase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000922759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.110772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACCA ATCCAAAACC AGCATTTCGA CGCATTCTTC TTAAGTTAAG TGGTGAGGCC
CTGATGGGCT CTGAGGGCTT CGGTATTGAT CCCAGCGTAC TGGATCGTAT GGCTCAGGAA
ATCAAAGAAC TGGTAGAACT GGGCATCCAG GTCGGGGTAG TGATTGGTGG TGGTAACCTG
TTCCGTGGAG AAGGTCTTGC CAAGGCAGGT ATGAACCGCG TGGTGGGTGA CCACATGGGT
ATGCTGGCGA CCGTGATGAA TGGTCTGGCA ATGCGCGATG CCTTGCACCG TGCCTATGTG
AATGCCCGTC TGATGTCTGC CATTCCCTTG AAAGGGGTGT GTGACGATTA TAATTGGGCC
GAGGCTATCA GCCTGCTCAA GTCCGGACGT GTGGTGATAT TCGCTGCCGG TACCGGTAAT
CCTTTCTGCA CCACCGACTC GGCGGCCTGT CTGCGCGGCA TTGAAATTGA AGCCGATGTC
GTGCTAAAAG GCACCAAAGT TGATGGCGTT TACTCCGCCG ATCCTATGAA GGACCCGGAA
GCCGTCAAAT ACGATGAACT CTCTTACGCC GAAGTTCTCG ATAAAGAATT GAAAGTGATG
GACTTATCTG CCTTTACCAT GGCGCGTGAC CATGATATGC CTATTTTGGT ATTCAACATG
AACAAGCCCG GTGCCCTGCG CCGTGTTATC ATGGGTGAAG GTGAAGGCAC CATCATCAAA
AAATAA
|
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| Protein sequence | MSTNPKPAFR RILLKLSGEA LMGSEGFGID PSVLDRMAQE IKELVELGIQ VGVVIGGGNL
FRGEGLAKAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARLMSAIPL KGVCDDYNWA
EAISLLKSGR VVIFAAGTGN PFCTTDSAAC LRGIEIEADV VLKGTKVDGV YSADPMKDPE
AVKYDELSYA EVLDKELKVM DLSAFTMARD HDMPILVFNM NKPGALRRVI MGEGEGTIIK
K
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