| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1042 |
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| Symbol | |
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| ID | 4603294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1259913 |
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| End bp | 1260548 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780381 |
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| Product | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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| Protein accession | YP_926919 |
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| Protein GI | 119774179 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCAGA CCGGCTCGAC GGTGGCAATC AACCTTGCAA AGAAGTTGTA TGACGCTGGG
ATCCGCGACA ACCTCGTTTT GCAGGCCATC GCCAACACGC CCCGGGAAAT GTTTCTGGAT
GCAGCTCTGG CACACAAAGC CTATGAAAAC ACCGCGCTGC CCATAGGTCA GGGGCAGACC
ATTTCCCAAC CTTATATCGT GGCGCGCATG ACAGAGCTGG TGATGCAAAA CCGGCCTCAA
CGGGTGCTGG AAGTGGGTAC GGGCTCTGGC TATCAGGCTG CTATCCTGGC GAAACTGGTA
CCAGAGCTTT GCACCATAGA GCGGATTAAG GCACTGCAAA TTCAGGCAAG GCAACGTCTT
AAGCGTCTGG ATTTGCACAA TGTGTCTTTT AAGTATGGTG ATGGCTGGCT GGGTTGGCCC
AACCGTGGTC CCTTTGATGC CATCATGGTG ACAGCCGCAG CCGCAAGCTT ACCAACTGCT
TTACTTGAGC AATTGTCTGA AGGCGGGAGG CTCATTATTC CGGTGGGTGA GGATGCCCAG
CAATTATTGG CCATTACCCG CAAGGGGCAG GAGTATTCCT CCGAGGTCAT TGAGTCGGTA
AAGTTTGTGC CCTTGGTCAA CGGAAACCTG GCGTAG
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| Protein sequence | MNQTGSTVAI NLAKKLYDAG IRDNLVLQAI ANTPREMFLD AALAHKAYEN TALPIGQGQT
ISQPYIVARM TELVMQNRPQ RVLEVGTGSG YQAAILAKLV PELCTIERIK ALQIQARQRL
KRLDLHNVSF KYGDGWLGWP NRGPFDAIMV TAAAASLPTA LLEQLSEGGR LIIPVGEDAQ
QLLAITRKGQ EYSSEVIESV KFVPLVNGNL A
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