Gene Sama_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1035 
SymbolpyrG 
ID4603287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1253255 
End bp1254892 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content54% 
IMG OID639780374 
ProductCTP synthetase 
Protein accessionYP_926912 
Protein GI119774172 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID[TIGR00337] CTP synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.946581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA GGTATATCTT CGTGACTGGC GGCGTGGTTT CGTCGCTGGG CAAAGGCATT 
GCAGCAGCAT CATTGGCAGC CATTCTCGAG GCACGGGGCC TCAACGTGAC CATCATGAAG
CTGGATCCTT ACATCAACGT TGACCCAGGT ACCATGAGCC CGACACAACA CGGTGAAGTG
TTTGTGACTG AGGACGGCGC AGAGACGGAT CTGGACCTGG GTCACTATGA GCGTTTCATC
CGTACCAAGA TGAACCGCCG TAACAACTTC ACCACCGGTC GTATTTACGA AGAAGTGCTG
CGTAAAGAGC GCCGTGGTGA CTATCTGGGC GCTACCATTC AGGTGATCCC ACACATCACC
AACGCCATCA AGGCTAAGGT GCTGGAAGGC GGTGAAGGCC ATGACGTGGC CATCGTGGAA
ATCGGTGGTA CCGTGGGTGA TATCGAATCC CTGCCGTTCC TCGAATCTAT CCGTCAGCTG
GGCGTTGAAC TGGGCCGCGA TCGCTCTATG TTCATGCACC TGACTCTGGT GCCATTCCTC
GGTGCTGCCG GCGAGGTGAA AACCAAGCCT ACCCAGCACT CGGTAAAAGA ACTGCGTTCT
ATCGGTATTG CGCCTGATAT TCTGGTTTGC CGCGGTGACC GCGCCATTCC TGCCAACGAG
CGGGCCAAGA TTTCCCTGTT CTGTAACGTG GAAGAGCGCG CTGTTATCTC TCTGAAAGAC
GTTGACTCCA TCTACAAGAT CCCGGCACTC CTGACCTCTC AGGGACTGGA TGACCTGGTC
TGCAAGCGTT TCCACTTGGA ATGCAAAGAA GCAGACCTGT CTGAGTGGGA AAACGTGATT
TATCAGGAAG CCAATCCCAA CGGTGAAATC ACCATTGGTA TGGTGGGCAA GTACATCGAG
CTGCCAGACG CCTATAAGTC AGTGAACGAG GCGCTCAAGC ACGCGGGCCT GAAAAACCGC
GTGACGGTTA ACATCAAGTA CATAGATTCA CAAAGCGTAG AGGCCAAAGG CGATGAAGCC
CTGGCTGGCC TCGACGGTAT TCTGGTGCCG GGCGGTTTCG GTGAGCGTGG TGTTGAAGGT
AAAATCCTTG CCGCCAAGTA TGCCCGTGAA AATGAGCTGC CTTACTTTGG TATTTGCCTC
GGTATGCAGG TAGCCCTTAT CGAGTTCGCC CGTAACGTGG CAGGTCTCAC AGATGCGCAC
TCTACCGAGT TCAATAAGCA AACTCCGCAT CCGGTTGTGG GTCTGATCAC AGAATGGATT
GACGAAGAAG GTAATATTGA GCAGCGCGAC GAAGCGTCCG ATCTGGGCGG CACCATGCGC
CTTGGCGCAC AGTTGTGTCA CCTCAAGGCA GGTACCAAGG CTGCTGAAGC TTACGGCTCC
GAGAGTTGTA TCGAGCGTCA TCGTCACCGC TATGAAGTGA ACAATCACTA TGTGAAGCAG
TTGGAAAAAG CCGGTCTGGT ATTCAGTGGC CTGTCTTCTG ACCGCAAACT GGTGGAAATG
ATTGAACTGC CAAACCACCC ATGGTTTGTG GCTGGTCAGT TCCATCCAGA GTTTACTTCA
ACACCCCGTG ACGGACATCC GCTGTTCGAA GGTTTTGTGG CAGCAGCCAG AGCGCACCAA
AAGCGCAGCC TGAGCTAA
 
Protein sequence
MTTRYIFVTG GVVSSLGKGI AAASLAAILE ARGLNVTIMK LDPYINVDPG TMSPTQHGEV 
FVTEDGAETD LDLGHYERFI RTKMNRRNNF TTGRIYEEVL RKERRGDYLG ATIQVIPHIT
NAIKAKVLEG GEGHDVAIVE IGGTVGDIES LPFLESIRQL GVELGRDRSM FMHLTLVPFL
GAAGEVKTKP TQHSVKELRS IGIAPDILVC RGDRAIPANE RAKISLFCNV EERAVISLKD
VDSIYKIPAL LTSQGLDDLV CKRFHLECKE ADLSEWENVI YQEANPNGEI TIGMVGKYIE
LPDAYKSVNE ALKHAGLKNR VTVNIKYIDS QSVEAKGDEA LAGLDGILVP GGFGERGVEG
KILAAKYARE NELPYFGICL GMQVALIEFA RNVAGLTDAH STEFNKQTPH PVVGLITEWI
DEEGNIEQRD EASDLGGTMR LGAQLCHLKA GTKAAEAYGS ESCIERHRHR YEVNNHYVKQ
LEKAGLVFSG LSSDRKLVEM IELPNHPWFV AGQFHPEFTS TPRDGHPLFE GFVAAARAHQ
KRSLS