| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1020 |
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| Symbol | nusB |
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| ID | 4603272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1234514 |
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| End bp | 1234918 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780359 |
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| Product | transcription antitermination protein NusB |
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| Protein accession | YP_926897 |
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| Protein GI | 119774157 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0554704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCCTT CAGAGCGCCG TAAGGCCCGT CGCCTGGCGG TCCAAGCTAT CTATTCCTGG
CAACTGAGCG GCAATAACGT TGCCGATGTC GAGCACGAGT TCCTGACCGA ACAAGAGCTG
GACGGTGTCG ATGTTGCTTA CTTCCGGGAG TTGTTTGCTG GCGCTGCAAC CAAAACCGCT
CAGCTGGATG AAAAGCTGAA ACCCCTGCTC GATCGTCCTC TTGAGGAAGT GTCACCAGTA
GAAAAAGCCA TTTTGCGCCT GGCAGTCTAC GAGCTGACTT TCCGCAAGGA CGTGCCTTAC
AAGGTGGTGA TCAACGAAGC CATCGAGCTG GCCAAATCCT TCGGTGCCGA AGACGGACAC
AAATTCGTTA ACGGTATTTT GGATAAGCTG GTTGCACGCA ACTAA
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| Protein sequence | MKPSERRKAR RLAVQAIYSW QLSGNNVADV EHEFLTEQEL DGVDVAYFRE LFAGAATKTA
QLDEKLKPLL DRPLEEVSPV EKAILRLAVY ELTFRKDVPY KVVINEAIEL AKSFGAEDGH
KFVNGILDKL VARN
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